Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_B19
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 4.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 4.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.3
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = -1
Query: 501 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQ 373
EAV++ R ++K+R Q S L ++ + E++ K+++
Sbjct: 178 EAVQEERQRTKERDQSEVESTSSLHSDMPI--ERILEAEKRVE 218
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = -1
Query: 501 EAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQ 373
EAV++ R ++K+R Q S L ++ + E++ K+++
Sbjct: 178 EAVQEERQRTKERDQSEVESTSSLHSDMPI--ERILEAEKRVE 218
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 630 PDSFLMLLEDNFYDMPPVKRGKRGV 556
P L L++ N+Y PP+ G+
Sbjct: 30 PPDMLHLIDANWYQYPPLNPMWHGI 54
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 105 NYNKLYYNINYIEQI 119
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 175 ISFVLSLNQKIHVHNLVFVSYHS 243
ISFV + +K H+L SY+S
Sbjct: 187 ISFVFGMKEKRKEHHLEGPSYNS 209
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 338 NYNKLYYNINYIEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 5 NLHKLYFNFNHKENL 49
N +KLY+N N+ E +
Sbjct: 338 NYNKLYYNINYIEQI 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,636
Number of Sequences: 438
Number of extensions: 2801
Number of successful extensions: 38
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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