Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B13
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M24355-1|AAA52454.1|  416|Homo sapiens FLG protein.                    33   0.63 
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.            33   0.63 
AB208881-1|BAD92118.1|  583|Homo sapiens PREDICTED: filaggrin va...    33   0.63 
M29581-1|AAA61314.1|  543|Homo sapiens ZNF8 protein.                   33   0.83 
BC039323-1|AAH39323.1|  575|Homo sapiens zinc finger protein 8 p...    31   4.5  
BC052266-1|AAH52266.1|  641|Homo sapiens FZD2 protein protein.         30   7.8  

>M24355-1|AAA52454.1|  416|Homo sapiens FLG protein.
          Length = 416

 Score = 33.5 bits (73), Expect = 0.63
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
 Frame = +3

Query: 255 HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 416
           H G +  S     + Q+  GS +   RHH   SRA S GH   GQ +S   + SR WG  
Sbjct: 119 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 178

Query: 417 ---EHRCRGHGRSQEK 455
              +   +GH    E+
Sbjct: 179 FSQDSDSQGHSEDSER 194


>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
          Length = 4061

 Score = 33.5 bits (73), Expect = 0.63
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
 Frame = +3

Query: 255  HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 416
            H G +  S     + Q+  GS +   RHH   SRA S GH   GQ +S   + SR WG  
Sbjct: 2507 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 2566

Query: 417  ---EHRCRGHGRSQEK 455
               +   +GH    E+
Sbjct: 2567 FSQDSDSQGHSEDSER 2582


>AB208881-1|BAD92118.1|  583|Homo sapiens PREDICTED: filaggrin
           variant protein.
          Length = 583

 Score = 33.5 bits (73), Expect = 0.63
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
 Frame = +3

Query: 255 HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 416
           H G +  S     + Q+  GS +   RHH   SRA S GH   GQ +S   + SR WG  
Sbjct: 23  HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 82

Query: 417 ---EHRCRGHGRSQEK 455
              +   +GH    E+
Sbjct: 83  FSQDSDSQGHSEDSER 98


>M29581-1|AAA61314.1|  543|Homo sapiens ZNF8 protein.
          Length = 543

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 291 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSK 398
           R  Q+   +S+ V+H H  SR  S G R  GQP S+
Sbjct: 469 RREQSSSRNSHLVQHQHPNSRKSSAGGRKAGQPESR 504


>BC039323-1|AAH39323.1|  575|Homo sapiens zinc finger protein 8
           protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 291 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSK 398
           R  Q+   +S+ V+H H  SR  S G    GQP S+
Sbjct: 501 RREQSSSRNSHLVQHQHPNSRKSSAGGAKAGQPESR 536


>BC052266-1|AAH52266.1|  641|Homo sapiens FZD2 protein protein.
          Length = 641

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 593 ASSVMMPRHXMPRLITPLLIMP 528
           A++ M PR  +PRL+ PLL++P
Sbjct: 73  AAASMRPRSALPRLLLPLLLLP 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,156,504
Number of Sequences: 237096
Number of extensions: 1312053
Number of successful extensions: 3443
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)