Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B11
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403     31   0.90 
01_05_0106 + 18160018-18160243,18160423-18160470,18160816-181609...    28   8.4  

>12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403
          Length = 505

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 25/80 (31%), Positives = 39/80 (48%)
 Frame = -2

Query: 565 SDRLSSLEQNDAIALSPRSLYEENITLKQKLARTKATLAETLTQLNAANLRKRSVQRAIC 386
           S + S+LE+ D   L  R   EE++  K+   R    +AETL + NA N   RS   A C
Sbjct: 296 SAKKSALERLDGYRLRLRKS-EEDLRHKEDERRV---VAETLKKANAENRSLRSDIEAAC 351

Query: 385 REIHKTQGVLRKARDQFETH 326
           +   +    L  A ++ ++H
Sbjct: 352 KRDAERDRQLASAEEKIKSH 371


>01_05_0106 +
           18160018-18160243,18160423-18160470,18160816-18160974,
           18162056-18162219,18162778-18162885,18163695-18163865,
           18163945-18164478,18164574-18164648,18164724-18164852,
           18164975-18165049,18165129-18165338,18165529-18165681,
           18165763-18165986,18166305-18166422,18166518-18166656,
           18166745-18166946,18166981-18167149,18167190-18167267,
           18167268-18167408,18167717-18167819,18169024-18169324,
           18169450-18169518,18169602-18169626,18170946-18170975
          Length = 1216

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 595 RPTSPDQGIDSDRLSSLEQNDAIALSPRSLYEENITLKQKLART 464
           R +S   G+ +  L     +D +   P+SL EE I  ++KLA T
Sbjct: 69  RASSAPPGVCALVLDLHSTDDLVGADPQSLLEEKIAAEEKLALT 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,030,551
Number of Sequences: 37544
Number of extensions: 218672
Number of successful extensions: 415
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)