Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B10
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p...    28   6.0  
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z32683-3|CAA83620.1|  124|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AL022289-2|CAA18374.1|  478|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
            protein F52C9.1a protein.
          Length = 1336

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 130  NSFLNLRSDNLSRLYT*KASMKFLLEQWT*YSNTRF*HDL 11
            NSF++  SD   +L++ K  +  +  QWT   +TR  HD+
Sbjct: 1121 NSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDI 1160


>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
            protein F52C9.1b protein.
          Length = 1331

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 130  NSFLNLRSDNLSRLYT*KASMKFLLEQWT*YSNTRF*HDL 11
            NSF++  SD   +L++ K  +  +  QWT   +TR  HD+
Sbjct: 1121 NSFVSASSDKTVKLWSIKPELDEIGCQWTYQKHTRPVHDI 1160


>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
           protein T24B8.7b protein.
          Length = 2923

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 461 HTTINGILRFVD*FVFKIIGSTRMCIVVQPGY 366
           H  ++ +L FVD F+  IIG    C  V+PG+
Sbjct: 205 HERMSEVLNFVDEFMSFIIGRHVNCSDVRPGF 236


>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
           protein T24B8.7a protein.
          Length = 2920

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 461 HTTINGILRFVD*FVFKIIGSTRMCIVVQPGY 366
           H  ++ +L FVD F+  IIG    C  V+PG+
Sbjct: 205 HERMSEVLNFVDEFMSFIIGRHVNCSDVRPGF 236


>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
           protein T24B8.7b protein.
          Length = 2923

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 461 HTTINGILRFVD*FVFKIIGSTRMCIVVQPGY 366
           H  ++ +L FVD F+  IIG    C  V+PG+
Sbjct: 205 HERMSEVLNFVDEFMSFIIGRHVNCSDVRPGF 236


>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
           protein T24B8.7a protein.
          Length = 2920

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 461 HTTINGILRFVD*FVFKIIGSTRMCIVVQPGY 366
           H  ++ +L FVD F+  IIG    C  V+PG+
Sbjct: 205 HERMSEVLNFVDEFMSFIIGRHVNCSDVRPGF 236


>Z32683-3|CAA83620.1|  124|Caenorhabditis elegans Hypothetical
           protein R07E5.5 protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 399 RANNFKNKSIYKSKDTVYCCM 461
           RA+  K  S+YK KDT+Y C+
Sbjct: 52  RADVEKALSVYKEKDTIYKCL 72


>AL022289-2|CAA18374.1|  478|Caenorhabditis elegans Hypothetical
           protein ZK1225.2 protein.
          Length = 478

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 67  SLKLFKYKVVINYQILNSE 123
           +LKLF+ K +IN  ILNSE
Sbjct: 273 TLKLFRNKTIINKTILNSE 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,104
Number of Sequences: 27780
Number of extensions: 255780
Number of successful extensions: 464
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)