Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B08
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.2  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 266 PFTLIFSQISTKSFHSPWTSTWI 334
           P  L F++I   SF+S WT  W+
Sbjct: 279 PGVLGFNEIC--SFYSDWTRVWL 299


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +2

Query: 242 QLCGIPFRPFTLIFSQISTKSFHSPWT 322
           Q C I F    L    +    FH+P+T
Sbjct: 474 QYCNIAFGDAVLYTIHMGYHGFHNPFT 500


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 559 GFYLDATNEPWNNNYRMGSYLNVELYDLILKAF 461
           G  +++  EP N  Y MG  L       ILK F
Sbjct: 145 GIRVNSVQEPNNEFYAMGRSLTTFSAFQILKIF 177


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 526 NNNYRMGSYLNVE 488
           N NY  G+Y+N E
Sbjct: 279 NTNYNPGTYINKE 291


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 591 SPSILTPRGEVSGPTTITPCXAA 659
           +PS++ P    S PTT T   +A
Sbjct: 240 APSVMYPHLNRSSPTTATAIASA 262


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 102 SCKMTGTPTERHASTKFSGSXCFSK*N 182
           +C+  G     H S  +SGS C ++ N
Sbjct: 160 TCEDIGNSHRCHCSDGYSGSYCQTEIN 186


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 293 STKSFHSPWTSTWITNRSKSA 355
           S  + HS W S W+   ++ A
Sbjct: 354 SASNRHSAWQSHWLNKGAEQA 374


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 591 SPSILTPRGEVSGPTTITPCXAA 659
           +PS++ P    S PTT T   +A
Sbjct: 188 APSVMYPHLNRSSPTTATAIASA 210


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 591 SPSILTPRGEVSGPTTITPCXAA 659
           +PS++ P    S PTT T   +A
Sbjct: 371 APSVMYPHLNRSSPTTATAIASA 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,945
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)