Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_B08
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 202 2e-52
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 202 2e-52
Z68227-4|CAA92518.1| 480|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68227-3|CAA92519.1| 507|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 5.3
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 5.3
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 5.3
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 5.3
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 5.3
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 5.3
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 5.3
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 27 9.2
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 202 bits (492), Expect = 2e-52
Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 1/215 (0%)
Frame = -2
Query: 673 GFQRYAAXHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLN 494
GFQ++A+ H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 66 GFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYIV 125
Query: 493 VELYDLILKAFCNVVDPXRXXXXXXXXXXXGALVSTLRNPGQYKSVSAFAPICNPSACPW 314
EL + ++ + +D + GAL LRN +++S+SAFAPICNP PW
Sbjct: 126 KELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPITVPW 184
Query: 313 GVKAFSGYLG-EDKSKWAEWDATELVKKYNGPPLTLLLDQGSGDKFYLEKQXLPENLVEA 137
G KA +GYLG EDKS W ++DA+E++K Y+GP +L+DQG+ D F Q PE L
Sbjct: 185 GQKALTGYLGDEDKSTWNQYDASEVLKAYSGPKREILVDQGAADNFL--AQLKPETLKS- 241
Query: 136 CRSVGVPVILQLRDGYDHSYYYISTYIGEHFDGHA 32
++++++ +DHSYY+I++++ +HF+ HA
Sbjct: 242 --KENAEIVVRMQAEFDHSYYFIASFMADHFEHHA 274
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 202 bits (492), Expect = 2e-52
Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 1/215 (0%)
Frame = -2
Query: 673 GFQRYAAXHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLN 494
GFQ++A+ H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 66 GFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYIV 125
Query: 493 VELYDLILKAFCNVVDPXRXXXXXXXXXXXGALVSTLRNPGQYKSVSAFAPICNPSACPW 314
EL + ++ + +D + GAL LRN +++S+SAFAPICNP PW
Sbjct: 126 KELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPITVPW 184
Query: 313 GVKAFSGYLG-EDKSKWAEWDATELVKKYNGPPLTLLLDQGSGDKFYLEKQXLPENLVEA 137
G KA +GYLG EDKS W ++DA+E++K Y+GP +L+DQG+ D F Q PE L
Sbjct: 185 GQKALTGYLGDEDKSTWNQYDASEVLKAYSGPKREILVDQGAADNFL--AQLKPETLKS- 241
Query: 136 CRSVGVPVILQLRDGYDHSYYYISTYIGEHFDGHA 32
++++++ +DHSYY+I++++ +HF+ HA
Sbjct: 242 --KENAEIVVRMQAEFDHSYYFIASFMADHFEHHA 274
>Z68227-4|CAA92518.1| 480|Caenorhabditis elegans Hypothetical
protein F49C12.5b protein.
Length = 480
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 124 LQNGMLPPNSQEVXASLNKIYHHFPDLVV 210
L+N M+ PN Q++ A L I H++ DLVV
Sbjct: 381 LENMMMKPNIQKIFAQLPDI-HYYTDLVV 408
>Z68227-3|CAA92519.1| 507|Caenorhabditis elegans Hypothetical
protein F49C12.5a protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 124 LQNGMLPPNSQEVXASLNKIYHHFPDLVV 210
L+N M+ PN Q++ A L I H++ DLVV
Sbjct: 408 LENMMMKPNIQKIFAQLPDI-HYYTDLVV 435
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 661 HLLECPHNCPTNIYSLMVECWHENIER 687
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 481 HIIQHSNNCPFCNYYSMVHLWHLNKNR 561
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 307 KAFSGYLGEDKSKWAEWDATELVKKYNGPPLTLLLDQGSGDKF-YLEKQXLPENLVEACR 131
+AFS +++ + T L +KY+ P T+LL + K + K PE L + +
Sbjct: 194 QAFSSLARHNETLLSSEIITRLAEKYHVPKTTVLLSWATSQKVGIIPKSTNPERLAQNLK 253
Query: 130 SV 125
+V
Sbjct: 254 TV 255
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 243 WLRNTMDLLLHYY*IREVVINFI*RSXYFLRIWWKHAVL*ESPSFCNYAMDMITPIITYX 64
W R DLL+H + +RE + + R LR+WW ++ + AM+ + P IT
Sbjct: 505 WSRTHPDLLVHNFTLRE-RLEKVYRRACQLRLWW---LVRYCAGRLHKAMNSLAPAITNM 560
Query: 63 L 61
L
Sbjct: 561 L 561
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,634,344
Number of Sequences: 27780
Number of extensions: 331771
Number of successful extensions: 829
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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