Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_B07
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0379 + 33505242-33505347,33505474-33505631,33506127-335061... 54 1e-07
07_01_0744 + 5687269-5687365,5687466-5687689,5688307-5688354,568... 48 5e-06
08_01_0907 + 8949102-8949160,8949662-8949842,8951816-8951941,895... 39 0.003
06_03_0540 - 21923763-21923945,21924027-21924776,21924895-219253... 32 0.25
11_06_0661 - 26009838-26010950,26011302-26011802 29 1.8
11_06_0649 + 25882657-25882782,25882983-25883175,25883354-25884120 29 2.4
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 29 2.4
03_05_1017 + 29730531-29730738,29730839-29730885,29731415-29731549 28 4.1
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060... 28 5.4
03_06_0102 + 31656268-31656304,31656625-31656920,31657967-31658080 28 5.4
08_01_1043 + 10565632-10565676,10565755-10565826,10566186-105662... 27 7.2
08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271 27 7.2
05_06_0025 + 25018426-25018596,25018692-25018892,25018983-250192... 27 7.2
10_08_0884 - 21283761-21283877,21283965-21284016,21284119-212841... 27 9.5
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 27 9.5
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 27 9.5
>03_06_0379 +
33505242-33505347,33505474-33505631,33506127-33506174,
33506851-33506919
Length = 126
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = -3
Query: 289 SGFNKYGLLRDDCL---HETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEW 119
S KYGL DD H+ D+ EAL RLP VVD R+ R+ RA+ LSM+ L + +
Sbjct: 30 SRLRKYGLRYDDLYDPKHDL-DIKEALERLPREVVDARHQRLKRAMDLSMKHQYLSENDQ 88
Query: 118 TKYEEDSRD*TPIVEQVEKERLEREQ 41
+ + +++ V+KERLERE+
Sbjct: 89 AQQTPFRGYLSDMMDLVKKERLEREE 114
>07_01_0744 +
5687269-5687365,5687466-5687689,5688307-5688354,
5689057-5689125
Length = 145
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 289 SGFNKYGLLRDDCL--HETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 125
S KYGL DD + D+ EAL RLP VVD RN R+ RA+ LSM+ LP +
Sbjct: 27 SRLRKYGLRYDDLYDPYHDLDIKEALARLPREVVDARNQRLKRAMDLSMKHQYLPAD 83
>08_01_0907 +
8949102-8949160,8949662-8949842,8951816-8951941,
8952082-8952092,8952237-8952360,8952447-8952546,
8952807-8952849,8953033-8953153
Length = 254
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -3
Query: 277 KYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEE 122
+Y L D + D+ EAL RLP VVD N R+ R + LS + LP +E
Sbjct: 28 RYDDLFDAYQYHGLDIKEALARLPREVVDAHNQRLKRTMDLSTKHQYLPADE 79
>06_03_0540 -
21923763-21923945,21924027-21924776,21924895-21925323,
21925509-21925619,21925715-21926040,21926130-21926251,
21926905-21927020,21927119-21927243,21927338-21927596
Length = 806
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -3
Query: 277 KYGLLRDDCLHETPDVTEALRR---LPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYE 107
K +L +C E V +AL R L V DE+ + ++ M KT+ +E ++K++
Sbjct: 353 KIKVLSSECTEEAKKVQDALHREELLKQKVADEKTRHLEAVTEVEMAKTLFAQEAFSKHK 412
Query: 106 ED 101
+
Sbjct: 413 AE 414
>11_06_0661 - 26009838-26010950,26011302-26011802
Length = 537
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 196 VDERNFRIVRAIQLSMQKT-ILPKEEWTKYEEDSRD*TPIVEQVEKERLEREQWEKED 26
VD F +V L+ +K +E K ED R E+ E+E +RE+WEKED
Sbjct: 399 VDIYGFGVVMLELLTGKKPHFFEEESEEKKREDKR------EECEEEAQKREEWEKED 450
>11_06_0649 + 25882657-25882782,25882983-25883175,25883354-25884120
Length = 361
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -3
Query: 196 VDERNFRIVRAIQLSMQKTILPKEEWTKYEEDSRD*TPIVEQVEKERLEREQWEKED*MR 17
+D +F +V L+ +K L KEEW + + + + + +KE ERE+ EK +
Sbjct: 216 IDIYSFGVVMLEVLTGKKPYLFKEEWKEEKREKCEQDGKNTEEDKEESEREEEEKTTEEQ 275
Query: 16 H 14
H
Sbjct: 276 H 276
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 219 SADFHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQNMKKI--PETEPQLLSKLRKRGWRE 46
S H + R+ L + ++ PC + Y+KK + + E + LL L+ +GW
Sbjct: 330 SGKLHRLEAVRDVHSLCLSWTLPCLHKEYMKKPEDYLAHLLGHEGKGSLLCFLKAKGWAS 389
Query: 45 S 43
S
Sbjct: 390 S 390
>03_05_1017 + 29730531-29730738,29730839-29730885,29731415-29731549
Length = 129
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 198 LLTRETSVLYVPYSSPCKK---QSYLKKSGQNMKKIPETEPQLLSKLRKRGWRESSG 37
LLT TS +P + +K Q YLKKS +N +K + + L KR +R+ G
Sbjct: 47 LLTFLTSTAAIPEAGESRKALLQEYLKKSKENKEK---NDKERLDDYYKRNYRDYFG 100
>07_03_1795 +
29603694-29605208,29605423-29605649,29605739-29606071,
29606229-29606475,29606948-29607076,29607161-29607376,
29607454-29607577,29608377-29608612
Length = 1008
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 165 PYSSPCKKQSYLKKSGQNMKKIPETEPQLLSKLRKRGWR 49
P S + + +L+ S N IPE EP L ++++ W+
Sbjct: 762 PEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQECNWQ 800
>03_06_0102 + 31656268-31656304,31656625-31656920,31657967-31658080
Length = 148
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 289 SGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAI-QLSMQKTILPKEE 122
SG++K G+ +H TP EAL R+ + R R + + +LS+ I PK++
Sbjct: 46 SGYDKAGMDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQK 102
>08_01_1043 +
10565632-10565676,10565755-10565826,10566186-10566289,
10566482-10566574,10571044-10571183,10571297-10571427
Length = 194
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = -1
Query: 360 LP*WLSEPRLLTEVTASANGPTIFRDSINMVCYGMIACMKLLM*LKHSADFHPML--LTR 187
LP WL+ L E S N P F AC+ L + + + + L
Sbjct: 48 LPFWLAHGLLSLEQAVSINVPPCFTQKTRKEIQADAACVDLRIRCPYFYELGCKIVPLVN 107
Query: 186 ETSV-LYVPYSSPCKKQSYLKKS-GQNMKKIPETEPQL 79
+ S+ L++ Y+ + + L KS +M +P+ P+L
Sbjct: 108 DRSIGLFLRYAFTSRYKEILSKSHSSSMMTVPKFVPRL 145
>08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271
Length = 450
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 175 IVRAIQLSMQKTILPKEEWTKYEEDSRD*TPIVEQ--VEKERLEREQWEKED 26
I++ + +S ++ + KEEW + E ++ P V++ VE E +++ E+E+
Sbjct: 71 ILKILDMSEEELAVVKEEWAEMEAKEKEEAPKVKETMVEWEARVKKRIEEEN 122
>05_06_0025 +
25018426-25018596,25018692-25018892,25018983-25019236,
25019468-25019540,25019659-25019715,25020219-25020298,
25020386-25020448,25020678-25020765,25021055-25021156,
25021296-25021369,25021690-25021754,25021933-25022096,
25022179-25022246,25022337-25022397,25022729-25022766,
25023154-25023329,25023747-25023859,25023944-25023955
Length = 619
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -3
Query: 289 SGF-NKYGLLRDDCLH------ETPDVTEALRRLPSHVVDER 185
+GF N YGL RDD E D+ ALR P H+V E+
Sbjct: 320 NGFINYYGLQRDDIREMREHYKEHGDIDMALRNFPRHLVAEK 361
>10_08_0884 -
21283761-21283877,21283965-21284016,21284119-21284187,
21284475-21284587,21284694-21284753,21284834-21285136
Length = 237
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 162 YSSPCKKQSYLKKSGQNMKKIPETEPQLLSKLRKRGWRES 43
YS+ + Y SGQ K + +PQL SKL ++ +++
Sbjct: 196 YSAMMILERYFSSSGQGAKIVLPKQPQLQSKLLEKSRQDA 235
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 165 PYSSPCKKQSYLKKSGQNMKKIPETEPQLLSKLRKRGWR 49
P S + + +L+ S N IPE +P L ++++ W+
Sbjct: 795 PEHSSARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQ 833
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -1
Query: 219 SADFHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQNMKKIPETEPQLLSKLRKRG 55
+ D HP+ + + V S CK S L K + +K++ +++P ++ + + G
Sbjct: 474 AVDAHPIKAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESG 528
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,079,508
Number of Sequences: 37544
Number of extensions: 246554
Number of successful extensions: 760
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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