Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B05
         (661 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g...    38   0.21 
UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY0404...    33   4.6  
UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmo...    33   6.1  
UniRef50_Q4UBT7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  

>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
          Length = 224

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 303 INWNYKFVHYYDCILYFYNHKFRQDYIIKNINKGKQYLIYSQFDN-RRQEQKF 458
           +N  YKF    +CI YFYN+  +    IK IN  K+  IY + DN    +QK+
Sbjct: 63  LNNKYKFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113


>UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY04041;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04041 - Plasmodium yoelii yoelii
          Length = 1521

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 315 YKFVHYYDCILYFYNHKFRQDYIIKNINKGKQYLIYSQFDNRRQEQKFDN 464
           YK+++ YDC LY   +K R   I KNI+K +    + +F+N +   K +N
Sbjct: 569 YKYINKYDC-LYCNKNKVRGGIIHKNISKDENNKGF-KFNNHKDYDKINN 616


>UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmodium
            (Vinckeia)|Rep: 1 beta dynein heavy chain - Plasmodium
            yoelii yoelii
          Length = 4507

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -3

Query: 287  TTAGPLVTLKSYYKLISENQPYNVDLNLY 201
            TT+GPLV + + YK  +EN  +N+D+ ++
Sbjct: 1011 TTSGPLVDISNTYKKGTENNDFNIDVTVF 1039


>UniRef50_Q4UBT7 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 2322

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -3

Query: 272 LVTLKSYYKLISENQPYNVDLNLYLLRYYISVSFQISNIMNQENLLASIN 123
           L+ +K+Y+K++    P + + N YLL     +    +N++N +NL+  +N
Sbjct: 319 LLHIKTYWKILLSYIPISFNFNQYLLPIQYIIIKNTNNLVNSKNLMDLVN 368


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,317,858
Number of Sequences: 1657284
Number of extensions: 9523030
Number of successful extensions: 22492
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22476
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)