Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_B05
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.32 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 506 YIPCI*RTHACLLFIVKLLFL 444
           Y P + + +ACLL +VK+L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 354 RSIKYNHNSVQTYNSN*L*SNFDY 283
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 354 RSIKYNHNSVQTYNSN*L*SNFDY 283
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 482 HACLLFIVKLLFLTSVVKLRID*ILFAFVYIFY 384
           +A ++F V LLFL  +    +       +Y FY
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 354 RSIKYNHNSVQTYNSN*L*SNFDY 283
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 354 RSIKYNHNSVQTYNSN*L*SNFDY 283
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +3

Query: 321 FVHYYDC---ILYFYNHKFRQDYIIKNINKGKQYLIYSQFDNR--RQEQKFD 461
           F+ Y  C   +LY+   K    +  KN+   K +L +  F N   R+E  F+
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEHIFE 53


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 413 ILFAFVYIFYNVVLAK 366
           I+F+F Y +YN  + K
Sbjct: 268 IVFSFCYCYYNSKMTK 283


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 440 SVVKLRID*ILFAFVYIFYNV 378
           +V ++R++   F FVY  YN+
Sbjct: 55  NVQEIRLEWKSFRFVYAVYNI 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,347
Number of Sequences: 336
Number of extensions: 2850
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)