Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A17
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 33 1.2
AL358789-2|CAI14913.1| 553|Homo sapiens mucolipin 3 protein. 32 2.1
AL358789-1|CAI14914.1| 497|Homo sapiens mucolipin 3 protein. 32 2.1
AK001868-1|BAA91951.1| 497|Homo sapiens protein ( Homo sapiens ... 32 2.1
AF475085-1|AAL84622.1| 553|Homo sapiens mucolipin-3 protein. 32 2.1
BC122869-1|AAI22870.1| 470|Homo sapiens G protein-coupled recep... 31 4.8
BC119779-1|AAI19780.1| 470|Homo sapiens G protein-coupled recep... 31 4.8
AY569571-1|AAS76893.1| 470|Homo sapiens G protein-coupled recep... 31 4.8
AB083620-1|BAB89333.1| 470|Homo sapiens putative G-protein coup... 31 4.8
AB065853-1|BAC06071.1| 470|Homo sapiens seven transmembrane hel... 31 4.8
BC100937-1|AAI00938.1| 301|Homo sapiens solute carrier family 2... 30 8.4
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
protein 1B protein.
Length = 2468
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -2
Query: 738 QKENLKKHRADCLAETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 559
+KE K+ + + E K ++ + KL D K + PL + +K ++ K+ KK
Sbjct: 710 KKEVKKEEKKEVKKEEKEPKKEIKKLPK-DAKKSSTPLSEAKKPAALKPKVPKKEESVKK 768
Query: 558 DVALAKVPNAEDKLKVEK 505
D A P + K+KV K
Sbjct: 769 DSVAAGKPKEKGKIKVIK 786
>AL358789-2|CAI14913.1| 553|Homo sapiens mucolipin 3 protein.
Length = 553
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 322 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CFL-V 146
C +G LVW + L F K+ +I+T N+I FC + +YL CF
Sbjct: 373 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCFCGW 431
Query: 145 ISFXSYKDKQXAAEXTGFC 89
I Y DK + C
Sbjct: 432 IVLGPYHDKFRSLNMVSEC 450
>AL358789-1|CAI14914.1| 497|Homo sapiens mucolipin 3 protein.
Length = 497
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 322 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CFL-V 146
C +G LVW + L F K+ +I+T N+I FC + +YL CF
Sbjct: 317 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCFCGW 375
Query: 145 ISFXSYKDKQXAAEXTGFC 89
I Y DK + C
Sbjct: 376 IVLGPYHDKFRSLNMVSEC 394
>AK001868-1|BAA91951.1| 497|Homo sapiens protein ( Homo sapiens
cDNA FLJ11006 fis, clone PLACE1003045. ).
Length = 497
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 322 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CFL-V 146
C +G LVW + L F K+ +I+T N+I FC + +YL CF
Sbjct: 317 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCFCGW 375
Query: 145 ISFXSYKDKQXAAEXTGFC 89
I Y DK + C
Sbjct: 376 IVLGPYHDKFRSLNMVSEC 394
>AF475085-1|AAL84622.1| 553|Homo sapiens mucolipin-3 protein.
Length = 553
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 322 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CFL-V 146
C +G LVW + L F K+ +I+T N+I FC + +YL CF
Sbjct: 373 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCFCGW 431
Query: 145 ISFXSYKDKQXAAEXTGFC 89
I Y DK + C
Sbjct: 432 IVLGPYHDKFRSLNMVSEC 450
>BC122869-1|AAI22870.1| 470|Homo sapiens G protein-coupled receptor
152 protein.
Length = 470
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 649 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 771
V CL F +S R+ E +G FL LLLL+C L+Q A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219
>BC119779-1|AAI19780.1| 470|Homo sapiens G protein-coupled receptor
152 protein.
Length = 470
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 649 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 771
V CL F +S R+ E +G FL LLLL+C L+Q A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219
>AY569571-1|AAS76893.1| 470|Homo sapiens G protein-coupled receptor
152 protein.
Length = 470
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 649 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 771
V CL F +S R+ E +G FL LLLL+C L+Q A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219
>AB083620-1|BAB89333.1| 470|Homo sapiens putative G-protein coupled
receptor protein.
Length = 470
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 649 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 771
V CL F +S R+ E +G FL LLLL+C L+Q A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219
>AB065853-1|BAC06071.1| 470|Homo sapiens seven transmembrane helix
receptor protein.
Length = 470
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 649 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNA 771
V CL F +S R+ E +G FL LLLL+C L+Q A
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATA 219
>BC100937-1|AAI00938.1| 301|Homo sapiens solute carrier family 25
(mitochondrial carrier; ornithine transporter) member
protein.
Length = 301
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 552 ALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKD 421
ALA P K +++ + + ++ K H T W+ VKC +KD
Sbjct: 121 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKCILKKD 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,541,001
Number of Sequences: 237096
Number of extensions: 2060517
Number of successful extensions: 4158
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4158
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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