Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A15
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 29 0.48
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 28 1.1
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 27 1.9
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 1.9
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 27 1.9
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 2.6
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 3.4
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 3.4
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 27 3.4
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 3.4
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 4.5
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 5.9
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 5.9
SPAC1071.04c |||signal peptidase subunit |Schizosaccharomyces po... 26 5.9
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 26 5.9
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 7.9
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 25 7.9
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 7.9
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 29.5 bits (63), Expect = 0.48
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -3
Query: 431 EMKSYFEECNNFIFVAMDFGNTTPV-INSFT-NVTNKITTHTD-PCL--GFGNSLPDMPL 267
E KSY NN +F TTPV FT N+ I + D P + GF +L MPL
Sbjct: 574 EFKSYVLFKNNLVFSETKHFGTTPVSFRRFTMNIGTYIICNNDCPHMVYGFNGALCYMPL 633
Query: 266 KKVEAGLTKMYDICK 222
+ + YD+C+
Sbjct: 634 -----SMPQSYDVCQ 643
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 521 PNTPKKNAKSRGKIVAEFVKSKKEAVSYVQEMKSYFEECNNFIFVAMDFGNT 366
P+ P +N KS A S E + ++C + +FV++DFG+T
Sbjct: 793 PSPPNQNGKSLFSFHPSRPAWLLYAGSENCEKNPFADDCRDVVFVSLDFGDT 844
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 211 LLSPLQISYILVRPASTFFNGISGKLFPKPKQGSVCVVILFVTFVKLFMTGVVFPKSI 384
LL PL I +L ++ G+S +L P +V + +F + + + +FP S+
Sbjct: 330 LLFPLCILLVLYLVSNFLSVGVSRRLANTPYVANVAFINMFFLTIYILIDAYLFPSSV 387
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 224 KGLNKISMKSKLLE-ELTALLKCNERHLPDAQLQERRPNLYEELSSIF 84
K + +++M L+ +L L K N H+P+ E N+Y LS+I+
Sbjct: 552 KDMGELNMIIDLIRNDLHQLAKKNSVHVPELYSVEEHSNVYSLLSNIY 599
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 27.5 bits (58), Expect = 1.9
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 242 KMYDICKGLNKISMKSKLLEELTAL--LKCNERHLPDAQLQERRPNLYEELSSIF 84
K+ D K LNK+ K +LLE AL L C R + L++ PN + L +F
Sbjct: 13 KLPDSSKNLNKLRWKFRLLESQFALYSLPCQLRFVHYNNLED--PNSFNGLLYLF 65
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 27.1 bits (57), Expect = 2.6
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Frame = +1
Query: 154 SLHFKSAVNSSKSLLFIEILLSPLQISYILVRPASTFFNGISGKL-----FPKPKQGSVC 318
S +F S+ KS++ I+ + +++ ++ P+ FN I G L P+P G +
Sbjct: 142 SEYFFSSPLVKKSIVQSPIIANGSELNVGVLGPS--LFNPI-GNLSDIPGLPQPGDGFLY 198
Query: 319 VVILFVTFVKLFMTGVVF--PKSIA 387
+ +LF F+ +F+ V+F KSIA
Sbjct: 199 LYVLFTYFISIFLLYVLFSSTKSIA 223
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.4
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Frame = -3
Query: 488 GKIVAEFVKSKKEAV-SYVQEMKSYFEECNNFIFVAMDFGNTTPV-----INSFTNVTNK 327
GKIV+ F++ + E++ + + S+ + N+ I A + N S +
Sbjct: 803 GKIVSNFLQEQNESLYTKADILHSHLNDTNSNIRKANEIMNNRSEEFLRNAASQAEIVGA 862
Query: 326 ITTHTDPCLGFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLE--ELTALLKCNE 153
+ G+ L D K + + MYD C L + + LE L LL+ +
Sbjct: 863 NKERIQKTVENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTLDRLLQKVK 922
Query: 152 RHLPDAQLQERRPNLYEELSSI 87
H D +E+ L + L S+
Sbjct: 923 EHSED-NTKEKHQQLLDLLESL 943
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 557 PLRKKMGVLLNLPNTPKKNAKSRGKIVAEFVKSKKEA 447
P +K+M +L +T KK KSR I + + SK+EA
Sbjct: 2 PPKKRMKNGSSLKSTSKKGEKSRNIITIQDLFSKREA 38
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 407 ILQNKISFLEHMIQPLFYFSQILLQFYLG 493
I+ + FL+H++Q + ++ + L+ YLG
Sbjct: 601 IVSHDSGFLDHVVQAIIHYERFKLRKYLG 629
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 239 MYDICKGLNKISMKSKLLEELTALLKCN 156
M D C+ L+ I LEE + L CN
Sbjct: 122 MLDCCRSLSDIEKDGVTLEEFSCLANCN 149
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 341 NVTNKITTHTDPCLGFGNSLPDMPLKKVEAGLTKMYDICKG 219
N TN +T+HT P S D+ + + + +DI G
Sbjct: 426 NATNVLTSHTAPVTALALSSDDVLITGADDKTVRQWDIVTG 466
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 263 KVEAGLTKMYDICKGLNKISMKSKL 189
KV+ L ++Y I K NK+S SKL
Sbjct: 540 KVQNDLARIYRIIKSQNKMSRSSKL 564
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 166 KSAVNSSKSLLFIEILLSPLQISYILVRPASTFFNGISG 282
K + +++ FI+ ++ PL IS+ + R + +GISG
Sbjct: 1057 KEKIFEHENMAFIDDMIQPLYISFAINRWLAIRTDGISG 1095
>SPAC1071.04c |||signal peptidase subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 167
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 425 SFLEHMIQPLFYFSQILLQFYLGFLHFSLVYLVSSK 532
S+L++++ PL++ + LL F+ + S VY+ + K
Sbjct: 64 SYLKYLL-PLYFLASCLLTFWSSVVKGSTVYVATKK 98
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -3
Query: 200 KSKLLEELTALLKCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLRTKT 21
++K + + A L+C RH+ AQ+ + + E GT+ + I +K
Sbjct: 26 RTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFM-----EETGTKREDIWFTSKL 80
Query: 20 GHLEG 6
L G
Sbjct: 81 NDLSG 85
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 480 NFTSAFCIFLWCIW*VQKYSHFLSEGRHSK 569
NF+ A +WC++ + SH++ E + K
Sbjct: 671 NFSFAIAFKIWCMFALDPKSHYMIEDPYMK 700
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 175 VNSSKSLLFIEILLSPLQ---ISYILVRPASTFFNGISGKLFPKPKQGSVCVVILFVTFV 345
VNS + + ILL L +I ++P + L KP + +C+V+ V V
Sbjct: 215 VNSGSGVRAVYILLLALGWCLFLFIAIKPLVYLLAVKTRSLKDKPSESFICIVLSMV-LV 273
Query: 346 KLFMTGVV 369
F T ++
Sbjct: 274 SAFFTDII 281
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 434 QEMKSYFEECNNFIFVAMDFGNTTPVINSFTNVTNKIT 321
Q + YFE+ N FI A+ N +++ F ++ +T
Sbjct: 104 QNILQYFEKSNKFIAFALS-KNAKVLVHCFAGISRSVT 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,930,495
Number of Sequences: 5004
Number of extensions: 62669
Number of successful extensions: 200
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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