Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_pT_A15
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132853-5|CAB60443.1|  279|Caenorhabditis elegans Hypothetical ...   100   2e-21
Z78016-1|CAB01439.1|  276|Caenorhabditis elegans Hypothetical pr...    65   4e-11
U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC090999-2|AAK26145.1|  139|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical p...    28   5.5  
AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine re...    28   5.5  
Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>AL132853-5|CAB60443.1|  279|Caenorhabditis elegans Hypothetical
           protein Y80D3A.9 protein.
          Length = 279

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 12/239 (5%)
 Frame = -3

Query: 692 IVATNRDEFYDRPXAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVLLNLP-- 519
           I+  NRDE  DRP   +  W D    +           GTWL +     K+G+LL++   
Sbjct: 19  IILNNRDEDLDRPTTPIH-WHDG---MLSGVDEKDVARGTWLGMDA-HGKVGMLLSITQP 73

Query: 518 -NTPKKNAKSRGKIVAEFVKSKKEAVSYVQEMKSYFEECNNFIFVAMDFGNTTPV--INS 348
            ++  KNA SRG IV E++KS  +   + + ++   E+ N F FV ++   TT +  + S
Sbjct: 74  VDSKHKNAPSRGGIVNEYLKSGTDTTKFYENLRENAEKFNGFQFVGVEKNPTTGLFHVQS 133

Query: 347 FTNV---TNKITTHTDPCLGFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLEEL 177
            TN      +I+   D    F NS P +P KK E GL    +  K  +++S++ ++ E+L
Sbjct: 134 LTNQLVDQIEISKWNDKFHVFSNSPPHVPFKKTEFGLKMFEEKLKNTDEMSVE-QIFEKL 192

Query: 176 TALLKCNERHLPDAQLQERR---PNLYEELSSIFVCVPE-ERYGTRAQTILLRTKTGHL 12
             +  C     PD Q++ +     ++Y+ L+SIFV  PE  RYGTR+ T+++  + G +
Sbjct: 193 FEIATCRTSCFPDDQIRAQTGFPEHIYKPLTSIFVRFPEIRRYGTRSHTLIVVDQNGQV 251


>Z78016-1|CAB01439.1|  276|Caenorhabditis elegans Hypothetical
           protein R186.1 protein.
          Length = 276

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
 Frame = -3

Query: 692 IVATNRDEFYDRPXAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVLLNLPNT 513
           I+  NRDE   RP  E+  W D    I           GTWL ++    ++G++L++  T
Sbjct: 19  ILLNNRDEQLLRPTKEMH-WHDG---ILSGVDKQENARGTWLGLNE-NGRIGMMLSITQT 73

Query: 512 PK-KN--AKSRGKIVAEFVKSKKEAVSYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFT 342
            + KN  A SRG IV EF+ +  +    ++ +K    + N F  VA++  +T   +    
Sbjct: 74  QESKNLHAPSRGGIVNEFLNAN-DTSKMIESLKKCASKYNGFQLVAVEKNSTG--LYEVR 130

Query: 341 NVTNKITTHTDPCL------GFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLEE 180
            + N+     + C          NS P  P +K   G   + +  +  ++ S+  ++ E+
Sbjct: 131 TLANQQVDEIEVCQLKDEYHVVSNSPPTKPYQKAVQGKKLLREHLENSDQFSV-DQIFEK 189

Query: 179 LTALLKCNERHLPDAQLQERRPNLYE---ELSSIFVCVPE--ERYGTRAQTIL 36
           L ++ K   +  PDAQLQ +  N+ E    LS+IF+  PE    YGTR  T++
Sbjct: 190 LLSIAKNTTQWYPDAQLQYQTQNVEEYNRPLSAIFIKYPEGTRMYGTRCHTLI 242


>U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical
           protein C01B7.1b protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
 Frame = -3

Query: 374 GNTTPVINSFTNVTNKITTHTDPCLGFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKS 195
           GNTT    S +  +N     TDP +   N  P M L  VE G+TK         +I +K+
Sbjct: 63  GNTT----STSLTSNSGLYPTDPTI-ISNHTPSMQLSCVECGVTKAN---SEEMEIHIKT 114

Query: 194 KLLEELT-ALLKCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTIL 36
           + L+ L      C      DAQ++E   + +++  S F+ V   +   R Q ++
Sbjct: 115 EHLKWLPFQCPMCLVERASDAQMREHLHSSHQKNMSKFIYVDNVKAKRRLQILM 168


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical
           protein C01B7.1a protein.
          Length = 935

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
 Frame = -3

Query: 374 GNTTPVINSFTNVTNKITTHTDPCLGFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKS 195
           GNTT    S +  +N     TDP +   N  P M L  VE G+TK         +I +K+
Sbjct: 63  GNTT----STSLTSNSGLYPTDPTI-ISNHTPSMQLSCVECGVTKAN---SEEMEIHIKT 114

Query: 194 KLLEELT-ALLKCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTIL 36
           + L+ L      C      DAQ++E   + +++  S F+ V   +   R Q ++
Sbjct: 115 EHLKWLPFQCPMCLVERASDAQMREHLHSSHQKNMSKFIYVDNVKAKRRLQILM 168


>AC090999-2|AAK26145.1|  139|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.9 protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 136 PNYKNVGLIYMKN*VLYLFVYLKKDMEQGRK 44
           P Y+NV L  +K+ ++YLF+YL + +    K
Sbjct: 82  PYYRNVTLNTIKSPIIYLFIYLLRSLRDVMK 112


>Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical
           protein K05C4.11 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 288 ISETQTRICMCCYFVCDIREAIYDWRGVSKVHCYKNEIITFFKIRFHFL 434
           I  +++R+C+    VCD      +     + HCY  EIIT   + F  +
Sbjct: 337 ICASRSRLCIHSSLVCDGIHNCVEGDFSDEQHCYSREIITSAALGFSLI 385


>AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine
           receptor, class x protein6 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 318 CCYFVCDIREAIYDWRGVSKVHCYKNEIITFFKI 419
           CC  + DI    Y +  +  VH Y N+I+  + +
Sbjct: 134 CCVLIVDIDIMSYMFLSIEGVHSYSNDILLVYDV 167


>Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical
           protein T07G12.10 protein.
          Length = 584

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = -3

Query: 512 PKKNAKSRGKIVAEFVKSKKEAVSYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFTNVT 333
           P KN  S    + +    +KE ++ V  +K +F+ CN  I   + +G    V ++ ++  
Sbjct: 444 PSKNRVSFAFPLVQSPNKQKEEMNKVHNIKCHFDNCNRKIHWKIRYGKLRLVDHALSHQE 503

Query: 332 NK 327
            K
Sbjct: 504 EK 505


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,910,730
Number of Sequences: 27780
Number of extensions: 340152
Number of successful extensions: 990
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)