Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A05
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 113 9e-26
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 38 0.007
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 38 0.007
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 38 0.007
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 38 0.007
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 38 0.009
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 36 0.021
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 30 1.4
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine re... 29 4.3
Z70683-5|CAE46666.1| 134|Caenorhabditis elegans Hypothetical pr... 28 5.7
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 28 5.7
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 28 5.7
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 28 5.7
Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 27 9.9
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 27 9.9
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 113 bits (273), Expect = 9e-26
Identities = 77/242 (31%), Positives = 111/242 (45%), Gaps = 20/242 (8%)
Frame = -2
Query: 705 LCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQS-GDIVST-----NNFK 544
LC +CG C++C+ YCS+ HQ+IDW HK +C + + G I N F
Sbjct: 145 LCRICGCSAAKKCAKCQVARYCSQAHQVIDWP-AHKLECAKAATDGSITDEPKNPRNAFC 203
Query: 543 ITKAGQSV--------LFKEWELIVXXXXXXDPNNTDINQEMEK-----LNKMMQEKKVG 403
+ G + LF + N+ D +E +K K ++E K G
Sbjct: 204 FKEFGVEIDQEYMPANLFDGLSDDEGDEEEEEGNDEDETEEEKKARIREFEKFVKENK-G 262
Query: 402 XXXXXXXXXXXEYTRTVPNDKVFNKFSKRVARHPEQVLRYDRGGLPLWITSNNDSLVHIP 223
E T P D F+KF++ V P+Q++RY R G PL T ++ +
Sbjct: 263 KNADMTKEDLDEATAEQPKDIDFDKFNRLVNLQPDQIIRYKRYGQPLRATGLSELPEVVE 322
Query: 222 KCEYCNGERQFEFQIMPQLLNFLDVGVELNSIDWGVLAIYTCKASCN-KGSAYMLEYMIK 46
CE C R+FE Q+MP LL+ +DV SIDW + +YTC ASC Y E++ K
Sbjct: 323 PCELCGAPRRFEMQLMPHLLSLIDVDAIGQSIDWASVYVYTCSASCQIADDGYAKEFVAK 382
Query: 45 QD 40
QD
Sbjct: 383 QD 384
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 702 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 553
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = -2
Query: 669 CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTNNFKI 541
CS C+++ YCS++ Q DW K HK +C +++ + V+ ++ ++
Sbjct: 39 CSACRRLAYCSQECQRADW-KLHKVECKAIKTHNEVANDSIRL 80
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 702 CDVCGARGPA-HCSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVS 559
C VCG G C++CK + YCS++ Q DW HK+ C L++ VS
Sbjct: 321 CSVCGHPGAKKRCTQCK-LAYCSQECQKFDWPI-HKKVCSFLKTRQEVS 367
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 34.3 bits (75), Expect = 0.086
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 669 CSRCKKMYYCSRKHQIIDWQK-GHKEQCPQLQSGDIV 562
C C YCS++ Q+ +W GH+E+C + + + V
Sbjct: 729 CEECYDAVYCSKECQVANWSTGGHREECSKRKPSETV 765
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 699 DVCGARGPAHCSRCKKMYYCSR--KHQIIDWQKGHKEQCPQLQ 577
++C A+ + +K YYC R H + +KGHK C L+
Sbjct: 9 EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 699 DVCGARGPAHCSRCKKMYYCSR--KHQIIDWQKGHKEQCPQLQ 577
++C A+ + +K YYC R H + +KGHK C L+
Sbjct: 9 EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 669 CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQ 577
C C + YC+ K Q DW+ H+ +C L+
Sbjct: 41 CDDCLAVSYCTLKCQRKDWKSCHQFECEILR 71
>AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine
receptor, class t protein16 protein.
Length = 330
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 1 IHYFNNNSVSIR*ILFYHILQHV 69
IHYFNN SV I +LFY + +V
Sbjct: 211 IHYFNNFSVIICTVLFYGYIAYV 233
>Z70683-5|CAE46666.1| 134|Caenorhabditis elegans Hypothetical
protein F13B12.7 protein.
Length = 134
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 678 PAHCSRCKKMYYCSRKH--QIIDWQKGHKEQCPQLQSG 571
P +C CKKM+ CS++ II G K+ Q G
Sbjct: 61 PTYCEVCKKMFICSKRSLTGIIYTPDGRKKDSIDFQYG 98
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 702 CDVCGARGPAHCSRCKKMY 646
C+ C A GP C +C K Y
Sbjct: 441 CETCTAPGPMSCEKCSKGY 459
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -2
Query: 648 YYCSR--KHQIIDWQKGHKEQC 589
Y+C + H ++ W+K HK++C
Sbjct: 135 YFCQKCKNHNVLVWKKNHKKEC 156
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 702 CDVCGARGPAHCSRCKKMY 646
C+ C A GP C +C K Y
Sbjct: 813 CETCTAPGPMSCEKCSKGY 831
>Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical
protein C27C12.6 protein.
Length = 260
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 669 CSRCKKMYYCSRKHQIIDWQKGHKEQC 589
C+RC R H ++ W KGHK C
Sbjct: 22 CARC-------RNHGLVSWLKGHKRHC 41
>Z81533-1|CAB04334.1| 329|Caenorhabditis elegans Hypothetical
protein F36G9.2 protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 559 THNITRLQLRTLFFMALLPVNNLMFPTTVVHF 654
T N+ R+ L LF ++P+N +FP V +
Sbjct: 234 TFNLQRVLLIALFIQVMVPLNLFIFPIAYVSY 265
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 333 NKFS--KRVARHPEQVLRYDRGGLPLWITSNNDSLVHIPKCEYCNGERQFEFQIMPQLLN 160
N+F KR R PE ++ +P+ I D + H P + C R+F F ++
Sbjct: 112 NRFEDFKRKLRDPEGLV------IPVVIGRCMDRVWHSPSLQLCYDTRRFRFALLDSAKY 165
Query: 159 FLDVGVELNSIDW--GVLAIYTCKAS 88
F+D V L ++ + I C+ S
Sbjct: 166 FMDNIVRLTEDNYVPSIQDIVHCRIS 191
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 333 NKFS--KRVARHPEQVLRYDRGGLPLWITSNNDSLVHIPKCEYCNGERQFEFQIMPQLLN 160
N+F KR R PE ++ +P+ I D + H P + C R+F F ++
Sbjct: 112 NRFEDFKRKLRDPEGLV------IPVVIGRCMDRVWHSPSLQLCYDTRRFRFALLDSAKY 165
Query: 159 FLDVGVELNSIDW--GVLAIYTCKAS 88
F+D V L ++ + I C+ S
Sbjct: 166 FMDNIVRLTEDNYVPSIQDIVHCRIS 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,380,218
Number of Sequences: 27780
Number of extensions: 315276
Number of successful extensions: 902
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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