Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A03
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122216-1|AAM52728.1| 308|Drosophila melanogaster LP09584p pro... 60 2e-09
AF274012-1|AAF90138.1| 308|Drosophila melanogaster tetraspanin ... 60 2e-09
AE014134-1574|AAN10683.1| 308|Drosophila melanogaster CG9496-PB... 60 2e-09
AE014134-1573|AAF52720.1| 308|Drosophila melanogaster CG9496-PA... 60 2e-09
AE013599-1296|AAF58649.1| 225|Drosophila melanogaster CG9033-PA... 41 0.002
AE013599-1295|AAM68735.1| 239|Drosophila melanogaster CG9033-PB... 41 0.002
AY071260-1|AAL48882.1| 236|Drosophila melanogaster RE29825p pro... 35 0.13
AE014296-2985|AAF49286.1| 236|Drosophila melanogaster CG5492-PB... 35 0.13
AE014296-2984|AAN11686.1| 236|Drosophila melanogaster CG5492-PA... 35 0.13
AY071356-1|AAL48978.1| 248|Drosophila melanogaster RE39366p pro... 33 0.40
AF274011-1|AAF90137.1| 248|Drosophila melanogaster tetraspanin ... 33 0.40
AE014134-1572|AAF52719.2| 248|Drosophila melanogaster CG9494-PA... 33 0.40
AE014297-3545|AAF56296.1| 429|Drosophila melanogaster CG17781-P... 32 0.92
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 29 4.9
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 29 6.5
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 29 6.5
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 29 6.5
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 29 6.5
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 29 6.5
>AY122216-1|AAM52728.1| 308|Drosophila melanogaster LP09584p
protein.
Length = 308
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/72 (34%), Positives = 47/72 (65%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVGEETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQI 524
++ VP+SCC + T + + T + C + Y GC ++ ++V+QSA L+ GA T+ F+Q+
Sbjct: 175 DVVVPNSCCG-NQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQL 233
Query: 523 IGIVFSFSLASS 488
+G++ +F LA +
Sbjct: 234 LGVLCAFMLAKT 245
>AF274012-1|AAF90138.1| 308|Drosophila melanogaster tetraspanin
29Fb protein.
Length = 308
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/72 (34%), Positives = 47/72 (65%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVGEETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQI 524
++ VP+SCC + T + + T + C + Y GC ++ ++V+QSA L+ GA T+ F+Q+
Sbjct: 175 DVVVPNSCCG-NQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQL 233
Query: 523 IGIVFSFSLASS 488
+G++ +F LA +
Sbjct: 234 LGVLCAFMLAKT 245
>AE014134-1574|AAN10683.1| 308|Drosophila melanogaster CG9496-PB,
isoform B protein.
Length = 308
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/72 (34%), Positives = 47/72 (65%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVGEETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQI 524
++ VP+SCC + T + + T + C + Y GC ++ ++V+QSA L+ GA T+ F+Q+
Sbjct: 175 DVVVPNSCCG-NQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQL 233
Query: 523 IGIVFSFSLASS 488
+G++ +F LA +
Sbjct: 234 LGVLCAFMLAKT 245
>AE014134-1573|AAF52720.1| 308|Drosophila melanogaster CG9496-PA,
isoform A protein.
Length = 308
Score = 60.5 bits (140), Expect = 2e-09
Identities = 25/72 (34%), Positives = 47/72 (65%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVGEETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQI 524
++ VP+SCC + T + + T + C + Y GC ++ ++V+QSA L+ GA T+ F+Q+
Sbjct: 175 DVVVPNSCCG-NQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQL 233
Query: 523 IGIVFSFSLASS 488
+G++ +F LA +
Sbjct: 234 LGVLCAFMLAKT 245
>AE013599-1296|AAF58649.1| 225|Drosophila melanogaster CG9033-PA,
isoform A protein.
Length = 225
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = -2
Query: 706 ANLTVPDSCCAQSHM-TVVG---EETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTI 539
AN T+P SCC ++ + VG E + K + GC+ ++ + ++A +L + I
Sbjct: 142 ANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGI 201
Query: 538 CFIQIIGIVFSFSLASS 488
FIQI+GIV + LA+S
Sbjct: 202 AFIQILGIVLACYLANS 218
>AE013599-1295|AAM68735.1| 239|Drosophila melanogaster CG9033-PB,
isoform B protein.
Length = 239
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = -2
Query: 706 ANLTVPDSCCAQSHM-TVVG---EETIVECHKIYANGCLPRVYYLVNQSAGLLGAGALTI 539
AN T+P SCC ++ + VG E + K + GC+ ++ + ++A +L + I
Sbjct: 156 ANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGI 215
Query: 538 CFIQIIGIVFSFSLASS 488
FIQI+GIV + LA+S
Sbjct: 216 AFIQILGIVLACYLANS 232
>AY071260-1|AAL48882.1| 236|Drosophila melanogaster RE29825p
protein.
Length = 236
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 VPDSCCAQSHMTVVGEETIVEC-HKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQIIG 518
VP+SCC + E TI +Y GCL + A ++G ++ + + I G
Sbjct: 165 VPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFG 224
Query: 517 IVFS 506
++FS
Sbjct: 225 MIFS 228
>AE014296-2985|AAF49286.1| 236|Drosophila melanogaster CG5492-PB,
isoform B protein.
Length = 236
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 VPDSCCAQSHMTVVGEETIVEC-HKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQIIG 518
VP+SCC + E TI +Y GCL + A ++G ++ + + I G
Sbjct: 165 VPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFG 224
Query: 517 IVFS 506
++FS
Sbjct: 225 MIFS 228
>AE014296-2984|AAN11686.1| 236|Drosophila melanogaster CG5492-PA,
isoform A protein.
Length = 236
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 VPDSCCAQSHMTVVGEETIVEC-HKIYANGCLPRVYYLVNQSAGLLGAGALTICFIQIIG 518
VP+SCC + E TI +Y GCL + A ++G ++ + + I G
Sbjct: 165 VPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFG 224
Query: 517 IVFS 506
++FS
Sbjct: 225 MIFS 228
>AY071356-1|AAL48978.1| 248|Drosophila melanogaster RE39366p
protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVG-------EETIVECHKIYANGCLPRVYYLVNQSAGLLGAGAL 545
N +P SCC H+ VG + ++ + HK+ GCL ++ A LGA +
Sbjct: 163 NGDLPISCC-NVHVGAVGTFTCNNAQSSVADRHKV---GCLDGFSGYISAHAVSLGAAGV 218
Query: 544 TICFIQIIGIVFSFSLA 494
I +Q G++F+ +A
Sbjct: 219 VIAILQFFGVIFACYIA 235
>AF274011-1|AAF90137.1| 248|Drosophila melanogaster tetraspanin
29Fa protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVG-------EETIVECHKIYANGCLPRVYYLVNQSAGLLGAGAL 545
N +P SCC H+ VG + ++ + HK+ GCL ++ A LGA +
Sbjct: 163 NGDLPISCC-NVHVGAVGTFTCNNAQSSVADRHKV---GCLDGFSGYISAHAVSLGAAGV 218
Query: 544 TICFIQIIGIVFSFSLA 494
I +Q G++F+ +A
Sbjct: 219 VIAILQFFGVIFACYIA 235
>AE014134-1572|AAF52719.2| 248|Drosophila melanogaster CG9494-PA
protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -2
Query: 703 NLTVPDSCCAQSHMTVVG-------EETIVECHKIYANGCLPRVYYLVNQSAGLLGAGAL 545
N +P SCC H+ VG + ++ + HK+ GCL ++ A LGA +
Sbjct: 163 NGDLPISCC-NVHVGAVGTFTCNNAQSSVADRHKV---GCLDGFSGYISAHAVSLGAAGV 218
Query: 544 TICFIQIIGIVFSFSLA 494
I +Q G++F+ +A
Sbjct: 219 VIAILQFFGVIFACYIA 235
>AE014297-3545|AAF56296.1| 429|Drosophila melanogaster CG17781-PA
protein.
Length = 429
Score = 31.9 bits (69), Expect = 0.92
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 430 SSAPGSPSVCVRVRSWLYGSSSPVRTRKRFRLSE*SRWSTRRLQVVQRFG*PNNRLWAGN 609
++A G S +W + SP ++R + + W TR Q VQ+ R+W +
Sbjct: 215 ANANGQQSQAAIPANW-HARQSPAEWQQRVKTTGADNWWTRNGQRVQQNWREKQRIWGPS 273
Query: 610 RWHRSY 627
+W +Y
Sbjct: 274 KWDYAY 279
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T+K P+W
Sbjct: 383 IDTSNPDRMRKMWKLLDEGKRTNQPNFPLKLETQKGPKW 421
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T++ P+W
Sbjct: 267 IDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKW 305
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T++ P+W
Sbjct: 383 IDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKW 421
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T++ P+W
Sbjct: 383 IDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKW 421
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T++ P+W
Sbjct: 345 IDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKW 383
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 491 LDP*SQDRTRTQ-TLGDPGADDQRPHFP*TLTTRKSPRW 378
+D + DR R L D G +P+FP L T++ P+W
Sbjct: 383 IDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKW 421
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,520,750
Number of Sequences: 53049
Number of extensions: 611687
Number of successful extensions: 1453
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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