Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A02
(775 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 25 0.59
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 24 1.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.4
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 24 1.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 7.3
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 7.3
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 9.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.6
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.6
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 25.4 bits (53), Expect = 0.59
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 605 REKKNHWKIPKKCVFC 558
R KKN +P +CVFC
Sbjct: 28 RRKKNKKPLPTECVFC 43
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 703 TRARHLYHHIATHTGRLPF 759
TR HL H+ HTG P+
Sbjct: 20 TRDHHLKTHMRLHTGEKPY 38
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN--LIYSFNRVS*IFL--NIYYIN 502
NN + ++ +KYNYN + N L Y+ N + I + +YY N
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGN 128
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN--LIYSFNRVS*IFL--NIYYIN 502
NN + ++ +KYNYN + N L Y+ N + I + +YY N
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGN 128
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN--LIYSFNRVS*IFL--NIYYIN 502
NN + ++ +KYNYN + N L Y+ N + I + +YY N
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGN 128
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN--LIYSFNRVS*IFL--NIYYIN 502
NN + ++ +KYNYN + N L Y+ N + I + +YY N
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGN 128
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.2 bits (50), Expect = 1.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 742 CASQCDGISVGLVSAPNLYXXICVRACLCARRPHLPM 632
CAS+ GI +PN +CV C RR H P+
Sbjct: 82 CASKYCGIGKECELSPNSTIAVCVCMRKCPRR-HRPV 117
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 558 TEYTFFWDFPMIFFLTYFINIYSVCIGRCGRRAQRHARTHIXXYKLGADTS 710
T +TF + PMI + Y+ I S + ++ + ++ + A+TS
Sbjct: 214 TIFTFSYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVDSLRSNANTS 264
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 413 HKYNYNAVSINLIYSFNRVS*IFL--NIYYIN 502
+KYNYN L Y+ N + I + +YY N
Sbjct: 96 YKYNYNNNCKKLYYNINYIEQIPIPVPVYYGN 127
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 727 HIATHTGRLPFV 762
H+ THTG P+V
Sbjct: 194 HMRTHTGEKPYV 205
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 707 EPDTYTITLRRTPDVFPLYRY 769
EP+ T TP FP Y Y
Sbjct: 320 EPNDEVATYDNTPRDFPYYMY 340
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 715 HLYHHIATHTGRLPF 759
HL +H+ H G PF
Sbjct: 3 HLEYHLRNHFGSKPF 17
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 9.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 235 GVSFHGTSTPPPSSLLFNVTYCVC--APLVLIPFVCGPWSSXR 113
GV ++ ++T P LL+N+ A +++P CG WSS +
Sbjct: 334 GVFYYLSTTVNP--LLYNIMSNKFREAFKLMLPNCCGKWSSQK 374
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN 445
NN + ++ +KYNYN + N
Sbjct: 86 NNTIHNNNYKYNYNNNNYN 104
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 389 NNILLSHLHKYNYNAVSIN 445
NN + ++ +KYNYN + N
Sbjct: 86 NNTIHNNNYKYNYNNNNYN 104
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 232 VSFHGTSTPPPSSLLFNVTYCVCAPLV 152
++F T PP + L+F+ C P V
Sbjct: 137 MTFDQTGIPPTTCLVFSSGSVSCVPSV 163
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,023
Number of Sequences: 438
Number of extensions: 4589
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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