Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_pT_A01
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 80 9e-16
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.24
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.24
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.24
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.24
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 0.96
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 29 2.9
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -3
Query: 549 AXSAAVAFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYEL 370
A AA FR++K V ++KT+ HPF +L ++++ +L
Sbjct: 51 ALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKL 110
Query: 369 RRLFLVEDLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANL 190
++L VE + S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L
Sbjct: 111 KKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 170
Query: 189 ELARAKINEITAKVRAAVPLGRRA 118
+ + + +P R A
Sbjct: 171 ATISGHLKNVQNIIDEKLPFLRSA 194
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -3
Query: 549 AXSAAVAFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYEL 370
A AA FR++K V ++KT+ HPF +L ++++ +L
Sbjct: 417 ALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKL 476
Query: 369 RRLFLVEDLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANL 190
++L VE + S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L
Sbjct: 477 KKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 536
Query: 189 ELARAKINEITAKVRAAVPLGRRA 118
+ + + +P R A
Sbjct: 537 ATISGHLKNVQNIIDEKLPFLRSA 560
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -3
Query: 549 AXSAAVAFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYEL 370
A AA FR++K V ++KT+ HPF +L ++++ +L
Sbjct: 2331 ALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKL 2390
Query: 369 RRLFLVEDLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANL 190
++L VE + S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L
Sbjct: 2391 KKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2450
Query: 189 ELARAKINEITAKVRAAVPLGRRA 118
+ + + +P R A
Sbjct: 2451 ATISGHLKNVQNIIDEKLPFLRSA 2474
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -3
Query: 549 AXSAAVAFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYEL 370
A AA FR++K V ++KT+ HPF +L ++++ +L
Sbjct: 69 ALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKL 128
Query: 369 RRLFLVEDLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANL 190
++L VE + S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L
Sbjct: 129 KKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 188
Query: 189 ELARAKINEITAKVRAAVPLGRRA 118
+ + + +P R A
Sbjct: 189 ATISGHLKNVQNIIDEKLPFLRSA 212
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 87.0 bits (206), Expect = 8e-18
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -3
Query: 549 AXSAAVAFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYEL 370
A AA FR++K V ++KT+ HPF +L ++++ +L
Sbjct: 2454 ALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKL 2513
Query: 369 RRLFLVEDLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANL 190
++L VE + S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L
Sbjct: 2514 KKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2573
Query: 189 ELARAKINEITAKVRAAVPLGRRA 118
+ + + +P R A
Sbjct: 2574 ATISGHLKNVQNIIDEKLPFLRSA 2597
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 80.2 bits (189), Expect = 9e-16
Identities = 39/137 (28%), Positives = 70/137 (51%)
Frame = -3
Query: 528 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXLYELRRLFLVE 349
F ++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401
Query: 348 DLVXSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMXKAQVDANLELARAKI 169
+ S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE + +D +L +
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHLATISGHL 2461
Query: 168 NEITAKVRAAVPLGRRA 118
+ + +P R A
Sbjct: 2462 KNVQNIIDEKLPFLRSA 2478
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 222 EMXKAQVDANLELARAKINEITAK 151
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 222 EMXKAQVDANLELARAKINEITAK 151
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 222 EMXKAQVDANLELARAKINEITAK 151
E KA++DAN+E RAKI+EI K
Sbjct: 407 EKLKAEIDANIEETRAKISEIAGK 430
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 222 EMXKAQVDANLELARAKINEITAK 151
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -3
Query: 222 EMXKAQVDANLELARAKINEITAK 151
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 244 QRYPTEDDERDPVEARPHVREAPQQHAELQRXHQVLHQ 357
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 235 QREQRYPTEDDERDPVEARPHVREAPQQHAELQR 336
+RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 162 RREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,443,047
Number of Sequences: 27780
Number of extensions: 98172
Number of successful extensions: 466
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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