Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P24
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 425  LAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSI 562
            +AHI  S+  +        EL  + LLDKQ AV EI+    +L  I
Sbjct: 1353 IAHILASTELNLCCTKKKEELSPNALLDKQ-AV-EIVKQLQKLQGI 1396


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 425  LAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSI 562
            +AHI  S+  +        EL  + LLDKQ AV EI+    +L  I
Sbjct: 1353 IAHILASTELNLCCTKKKEELSPNALLDKQ-AV-EIVKQLQKLQGI 1396


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 425  LAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSI 562
            +AHI  S+  +        EL  + LLDKQ AV EI+    +L  I
Sbjct: 1353 IAHILASTELNLCCTKKKEELSPNALLDKQ-AV-EIVKQLQKLQGI 1396


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 425  LAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSI 562
            +AHI  S+  +        EL  + LLDKQ AV EI+    +L  I
Sbjct: 1353 IAHILASTELNLCCTKKKEELSPNALLDKQ-AV-EIVKQLQKLQGI 1396


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 460 CRSN*RTKYMCQVCTYFECAN 398
           C  + R +  CQ C Y +C N
Sbjct: 128 CIIDKRQRNRCQYCRYQKCLN 148


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 368 LKNHQLPLFFRLALYDYF 315
           L+NH +PL  RL+  D+F
Sbjct: 126 LENHFVPLVQRLSAGDWF 143


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 355 NYPYSSGLPFMT 320
           N PY  G+PF+T
Sbjct: 142 NSPYMDGVPFVT 153


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 25  CYYGFFCXFXVLYYSIL 75
           C Y FFC F +    +L
Sbjct: 165 CIYHFFCAFIIFTMHLL 181



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 4   CVMVI*XCYYGFFCXFXVLYYSIL 75
           CV++I  C Y F+  F +    +L
Sbjct: 230 CVLIILLCIYYFYYAFILFTVHLL 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,846
Number of Sequences: 336
Number of extensions: 3692
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)