Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P24
         (761 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041028-1|AAH41028.1|  347|Homo sapiens FLJ10769 protein protein.    205   1e-52
AL139385-4|CAI17008.1|  390|Homo sapiens novel protein containin...   205   1e-52
AK001631-1|BAA91797.1|  390|Homo sapiens protein ( Homo sapiens ...   203   5e-52
AF091088-1|AAC72957.1|  114|Homo sapiens unknown protein.              95   2e-19
AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar t...    30   7.8  
AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar t...    30   7.8  

>BC041028-1|AAH41028.1|  347|Homo sapiens FLJ10769 protein protein.
          Length = 347

 Score =  205 bits (501), Expect = 1e-52
 Identities = 96/181 (53%), Positives = 129/181 (71%)
 Frame = +2

Query: 218 ILLKSFSLIRHRYNMDPTSMKNLIKICIPPLDKSSHKGQAGRIGVIGGSLEYTGAPYFAG 397
           +L ++FSL +     D  +   L++  IPPL  + HKGQ GRIGV+GG  EYTGAPYFA 
Sbjct: 34  VLERAFSLRKAHSIKDMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAA 93

Query: 398 ISALKVGADLAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPG 577
           ISALKVGADL+H+FC+S A+ VIK+YSPELIVHP+LD  +AV E+  W  RLH++V+GPG
Sbjct: 94  ISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPG 153

Query: 578 LGRDWQTFDIIAKLIEVIKQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIXFER 757
           LGRD      +  ++EV K + IP++IDADGL+L+ ++P LI  +    +LTPN + F R
Sbjct: 154 LGRDDALLRNVQGILEVSKARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPNHVEFSR 212

Query: 758 L 760
           L
Sbjct: 213 L 213


>AL139385-4|CAI17008.1|  390|Homo sapiens novel protein containing a
           carbohydrate kinase domain protein.
          Length = 390

 Score =  205 bits (501), Expect = 1e-52
 Identities = 96/181 (53%), Positives = 129/181 (71%)
 Frame = +2

Query: 218 ILLKSFSLIRHRYNMDPTSMKNLIKICIPPLDKSSHKGQAGRIGVIGGSLEYTGAPYFAG 397
           +L ++FSL +     D  +   L++  IPPL  + HKGQ GRIGV+GG  EYTGAPYFA 
Sbjct: 34  VLERAFSLRKAHSIKDMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAA 93

Query: 398 ISALKVGADLAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPG 577
           ISALKVGADL+H+FC+S A+ VIK+YSPELIVHP+LD  +AV E+  W  RLH++V+GPG
Sbjct: 94  ISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPG 153

Query: 578 LGRDWQTFDIIAKLIEVIKQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIXFER 757
           LGRD      +  ++EV K + IP++IDADGL+L+ ++P LI  +    +LTPN + F R
Sbjct: 154 LGRDDALLRNVQGILEVSKARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPNHVEFSR 212

Query: 758 L 760
           L
Sbjct: 213 L 213


>AK001631-1|BAA91797.1|  390|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10769 fis, clone NT2RP4000151. ).
          Length = 390

 Score =  203 bits (496), Expect = 5e-52
 Identities = 95/181 (52%), Positives = 129/181 (71%)
 Frame = +2

Query: 218 ILLKSFSLIRHRYNMDPTSMKNLIKICIPPLDKSSHKGQAGRIGVIGGSLEYTGAPYFAG 397
           +L ++FSL +     D  +   L++  IPPL  + HKGQ GRIGV+GG  EYTGAPYFA 
Sbjct: 34  VLERAFSLRKAHSIKDMENTLQLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAA 93

Query: 398 ISALKVGADLAHIFCSSVASAVIKSYSPELIVHPLLDKQDAVEEILPWFDRLHSIVIGPG 577
           ISALKVGADL+H+FC+S A+ VIK+YSPELIVHP+LD  +AV E+  W  RLH++V+GPG
Sbjct: 94  ISALKVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVGPG 153

Query: 578 LGRDWQTFDIIAKLIEVIKQKKIPIIIDADGLFLITEKPNLIKDFDSPVILTPNKIXFER 757
           LGRD      +  ++EV K + IP++IDADGL+L+ ++P LI  +    +LTP+ + F R
Sbjct: 154 LGRDDALLRNVQGILEVSKARDIPVVIDADGLWLVAQQPALIHGY-RKAVLTPDHVEFSR 212

Query: 758 L 760
           L
Sbjct: 213 L 213


>AF091088-1|AAC72957.1|  114|Homo sapiens unknown protein.
          Length = 114

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 43/93 (46%), Positives = 63/93 (67%)
 Frame = +2

Query: 482 ELIVHPLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDIIAKLIEVIKQKKIPIIID 661
           E+IVHP+LD  +AV E+  W  RLH++V+G GLGRD      +  ++EV K + IP++ID
Sbjct: 5   EMIVHPVLDSPNAVHEVEKWLPRLHALVVGTGLGRDDALLRNVQGILEVSKARDIPVVID 64

Query: 662 ADGLFLITEKPNLIKDFDSPVILTPNKIXFERL 760
           ADGL+L+ ++P LI  +    +LTPN + F RL
Sbjct: 65  ADGLWLVAQQPALIHGY-RKAVLTPNHVEFSRL 96


>AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 497 PLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDII 610
           PLL +Q  + +I+ WF+R   I+   GL  D     +I
Sbjct: 102 PLLIRQGLIPKIISWFERTTGILTSEGLASDTSLICVI 139


>AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 497 PLLDKQDAVEEILPWFDRLHSIVIGPGLGRDWQTFDII 610
           PLL +Q  + +I+ WF+R   I+   GL  D     +I
Sbjct: 102 PLLIRQGLIPKIISWFERTTGILTSEGLASDTSLICVI 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,307,152
Number of Sequences: 237096
Number of extensions: 1969153
Number of successful extensions: 3935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3932
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)