Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P21
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41026-3|AAL02447.3| 817|Caenorhabditis elegans Hypothetical pr... 128 5e-30
Z83218-6|CAI58632.1| 273|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 32 0.48
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 32 0.48
AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical... 31 0.84
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 31 0.84
Z70270-11|CAJ80821.1| 606|Caenorhabditis elegans Hypothetical p... 29 2.6
Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-18|CAJ80818.1| 606|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical p... 29 2.6
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 29 2.6
AF003140-1|ABR92609.1| 538|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 4.5
Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U41026-3|AAL02447.3| 817|Caenorhabditis elegans Hypothetical
protein C28G1.3 protein.
Length = 817
Score = 128 bits (308), Expect = 5e-30
Identities = 55/173 (31%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Frame = +1
Query: 211 IQEIEGIDD-YWGPAFRSVYEGEGHEAFVQQLDDRIKQHDKEIEKLCNFHYQGFIDSIRE 387
+ E+E D G R++Y+ ++F + L RI +DK I+K+C+FHYQ F+D+++E
Sbjct: 36 LYELETTDSGSMGLVLRAIYDTGDVQSFARALQQRISHYDKNIQKVCSFHYQSFVDAMQE 95
Query: 388 LLQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARRVELNIAATIEKMELCLPLL 567
L++++ +++ E +DA +++ ++ LC + E++R R++ N ++++ +CLP+L
Sbjct: 96 LMKLKEQCQDIKEETVAIDAEIQQISQRLCQKKQEIVRYRKLMKNAKTAMDQIAVCLPVL 155
Query: 568 TTYSKLKSQVXAKRYYPALKTLXQLEHVLLPRVGPYKWCAQISSDIPRLRXAI 726
Y+KL+ Q+ ++YY ALKTL +LEH L V Y++ ++ + +R I
Sbjct: 156 ENYAKLQEQMSNRKYYQALKTLEELEHTHLALVEKYRFTQVLAKSMAPVRLEI 208
>Z83218-6|CAI58632.1| 273|Caenorhabditis elegans Hypothetical
protein C31A11.10 protein.
Length = 273
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 534 GSCNVQFDSSSP-DQFVCSNAQCFSSLFDISIYIRYFSMQFFSMRTDLQQFSY-RIYETL 361
G C+V D+ D F+C+ QC+++ + + I FS FFS + F + + T
Sbjct: 144 GVCDVVIDTPLDCDSFLCAMNQCYTTYWLLHERITTFSNVFFSAVVTFRLFIWNHFFSTQ 203
Query: 360 IVKIAQF 340
+IA F
Sbjct: 204 ATRIALF 210
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/102 (21%), Positives = 51/102 (50%)
Frame = +1
Query: 211 IQEIEGIDDYWGPAFRSVYEGEGHEAFVQQLDDRIKQHDKEIEKLCNFHYQGFIDSIREL 390
IQ +E + + +G Y+ E ++ V + ++ ++ +EK CN H ++S++++
Sbjct: 486 IQTVEDVLNVYGK-----YQVEANKKMVDEAVEKHREAISSLEKECNMH----LESLKKM 536
Query: 391 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARRVE 516
R E L+AE+ ++K+ E + E+++ + E
Sbjct: 537 NDSRKEFEVLNAELEKKVFDLKKVLEMEQGKIAEMLKNKERE 578
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/102 (21%), Positives = 51/102 (50%)
Frame = +1
Query: 211 IQEIEGIDDYWGPAFRSVYEGEGHEAFVQQLDDRIKQHDKEIEKLCNFHYQGFIDSIREL 390
IQ +E + + +G Y+ E ++ V + ++ ++ +EK CN H ++S++++
Sbjct: 486 IQTVEDVLNVYGK-----YQVEANKKMVDEAVEKHREAISSLEKECNMH----LESLKKM 536
Query: 391 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARRVE 516
R E L+AE+ ++K+ E + E+++ + E
Sbjct: 537 NDSRKEFEVLNAELEKKVFDLKKVLEMEQGKIAEMLKNKERE 578
>AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical
protein Y53F4B.19 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -1
Query: 337 QFPYRAALFDHL--IVARMLRA--LHLRKRIGMPAPNNHLYLRFPESLHSFSEIILFFFS 170
Q + +FDH ++ RML+A + K + MP PN +LY++ + + S++ +
Sbjct: 215 QVDFNNVIFDHRNRVLDRMLKANVVEKEKLLYMPTPNLNLYMQNLRNQKNRSKLAVLLER 274
Query: 169 NSIAIKGIK 143
A KG++
Sbjct: 275 RGDAFKGVQ 283
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Frame = +1
Query: 250 AFRSVYEGEGHEAFVQQLDDRIKQHDKEIEKLCNFHYQGFIDSIR--ELLQVRSHAEELH 423
AFR++Y G E ++ D R + +++C + F+D IR E+ +R+
Sbjct: 292 AFRNIYGGHEQEKKKKKWDPRFDARAGDFKEVCFENNYQFLDEIRTGEMQDLRNEYNTAR 351
Query: 424 AEISNVDA-NVKETTEALCIRADELIRARR-VELNIAATIEKMELCL----PLLTTYSKL 585
AE A +K T + R RR E + +E L P+ T +++
Sbjct: 352 AEGDEKKAERLKNTLHKMETREKTRAEKRRHAETRKELHDDNIERMLRGEAPIFRTKAQV 411
Query: 586 KSQVXAKRYYPALKTLXQLEHVL 654
+ ++ A++ Y LK +L+ L
Sbjct: 412 R-RIDAEKKYEELKKDNKLDKYL 433
>Z70270-11|CAJ80821.1| 606|Caenorhabditis elegans Hypothetical
protein C53B4.8b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 307 DRIKQHDKEIEKLCNFHYQGFIDSIRELL 393
D++K KE++KL HY +I ++ LL
Sbjct: 34 DKMKMDSKEVDKLQQLHYGWYIQAVSSLL 62
>Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 307 DRIKQHDKEIEKLCNFHYQGFIDSIRELL 393
D++K KE++KL HY +I ++ LL
Sbjct: 34 DKMKMDSKEVDKLQQLHYGWYIQAVSSLL 62
>Z68215-18|CAJ80818.1| 606|Caenorhabditis elegans Hypothetical
protein C53B4.8b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 307 DRIKQHDKEIEKLCNFHYQGFIDSIRELL 393
D++K KE++KL HY +I ++ LL
Sbjct: 34 DKMKMDSKEVDKLQQLHYGWYIQAVSSLL 62
>Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 307 DRIKQHDKEIEKLCNFHYQGFIDSIRELL 393
D++K KE++KL HY +I ++ LL
Sbjct: 34 DKMKMDSKEVDKLQQLHYGWYIQAVSSLL 62
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 576 VSSEER*TQFHFFNGS--CNVQFD 511
+S ER FHFFN S CN+ FD
Sbjct: 419 ISENERGKSFHFFNRSINCNINFD 442
>AF003140-1|ABR92609.1| 538|Caenorhabditis elegans Hypothetical
protein C44E4.5 protein.
Length = 538
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -2
Query: 525 NVQFDSSSPDQFVCSNAQCFSSLFDISIYIRYFSM--QFF---SMRTDLQQFSYRIYET 364
NV F S S DQ +C A + + + +++ FS Q F S TD QQF YRI +T
Sbjct: 26 NVHFSSKSLDQNLCLRAPS-NEMITLQ-HMKVFSNDNQLFCDYSKCTDSQQFLYRILDT 82
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 LLQVRSHAEELHA-EISNVDANVKETTEALCIRADELIRARRVELNIAATIEKME 549
LL R+H ++L A E+ V +N TTEA C+++ I A V N A ++K +
Sbjct: 382 LLTSRTHNKDLCAFELYKVASNSDGTTEAACVKSTG-INALWVARNRFAVLDKAQ 435
>Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical
protein C49A1.1 protein.
Length = 246
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 597 YLGFEFGVSSEER*TQFHFFNGSCNVQFDSSSPDQFVCSNAQC 469
Y+GFEFG S E QF G+ + Q Q +C+N QC
Sbjct: 77 YVGFEFGESCE----QF----GATDEQLRGHFEYQMICTNVQC 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,934
Number of Sequences: 27780
Number of extensions: 261027
Number of successful extensions: 774
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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