Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P20
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.43 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -2

Query: 505 RSSATNPTHSSRT-FRLCL*PSSMCTQVQPIYVTMASAGP--GSTHIHN---GVLKNINS 344
           R+S +NPT+SSR+    C    +  +    +Y   A++ P   ++H+H+    +L  +  
Sbjct: 88  RTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHHHQTSLLGKVEG 147

Query: 343 TAQH 332
            A H
Sbjct: 148 AATH 151


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 183 LSITFTCNSCYNQI 142
           +++ + CN CYN +
Sbjct: 281 VNVLYICNQCYNTV 294


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 297 FLQEVMLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIG 422
           FL  ++L  VLL   V  +      W C+ P P       IG
Sbjct: 2   FLAPIILCLVLLALLVSSLRKKGRFWECLAPIPQPPAYPIIG 43


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 297 FLQEVMLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIG 422
           FL  ++L  VLL   V  +      W C+ P P       IG
Sbjct: 2   FLAPIILCLVLLALLVSSLRKKGRFWECLAPIPQPPAYPIIG 43


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = -1

Query: 539 HDPVRXVHQRPAELRHEPDPLVAHLPLMFVTKFNVHTGAADI 414
           + P+  V +   +++ +    V+ +   F  +FN HTG  ++
Sbjct: 457 YQPIYFVAESFDDMKDKFRRWVSAMSRPFEVRFNPHTGRVEV 498


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 465 SAYVCDQVQCAHRCSR 418
           S +  DQ QC+HR  R
Sbjct: 8   SVFRLDQDQCSHRIVR 23


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 465 SAYVCDQVQCAHRCSR 418
           S +  DQ QC+HR  R
Sbjct: 322 SVFRLDQDQCSHRIVR 337


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 465 SAYVCDQVQCAHRCSR 418
           S +  DQ QC+HR  R
Sbjct: 555 SVFRLDQDQCSHRIVR 570


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 465 SAYVCDQVQCAHRCSR 418
           S +  DQ QC+HR  R
Sbjct: 555 SVFRLDQDQCSHRIVR 570


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,238
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)