Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P20
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      29   0.099
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   4.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.6  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 0.099
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
 Frame = +1

Query: 304 RK*CCNLSCCAVR---CCLYSSVLHCGYVCYQVLH 399
           R+ CC+   C V    CC Y   L   Y CY+  H
Sbjct: 171 RQPCCSTLLCVVVVPFCCRYWHSLRLSYACYRAKH 205


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 371  QWSTEEYKQHRTAQQDKLQHHFLQKKIEES 282
            Q   ++ +QH+  QQ +LQHH  Q ++ +S
Sbjct: 1313 QQQQQQQQQHQQHQQHQLQHHH-QPQLSQS 1341


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 212 GSPRRSGCPGHPSSARP 262
           G P R G PG P  A P
Sbjct: 383 GEPGRDGIPGQPGIAGP 399


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 383 HTYPQWSTEEYKQHRTAQQDKLQHH 309
           H   Q   ++  QH  A Q + QHH
Sbjct: 636 HLLQQQQQQQQHQHHQAHQHQGQHH 660


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 236 GILIFGASLPHKHYALRH*VSLLHATHVT 150
           G  + GASL H H+A  H     H  H T
Sbjct: 486 GSTVNGASLTHSHHAHPHHHHHHHHHHPT 514


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,901
Number of Sequences: 2352
Number of extensions: 13097
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)