Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P18
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 460 CIYSFYCVVSLF 425
           CIY FYC   +F
Sbjct: 145 CIYYFYCAFIIF 156



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 460 CIYSFYCVVSLF 425
           CIY F+C   +F
Sbjct: 165 CIYHFFCAFIIF 176



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -2

Query: 490 YVLISRHLPN--CIYSFYCVV 434
           +++ + HL    CIY FYC +
Sbjct: 272 FIIFTMHLLFLLCIYYFYCAL 292


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 169 EINKKKINPFEVHVNREKIKVLGK 240
           EI ++  NP+   V R  +  LGK
Sbjct: 245 EIRRRTRNPYGDSVTRSSLAFLGK 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 490 RGQTLEQIEKFDDPRSDD 543
           RG+  E +E   DPR DD
Sbjct: 158 RGRHSEIVETVYDPREDD 175


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 169 EINKKKINPFEVHVNREKIKVLGK 240
           EI ++  NP+   V R  +  LGK
Sbjct: 245 EIRRRTRNPYGDSVTRSSLAFLGK 268


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -3

Query: 510 LLQRLASMC*YLVICQIVYTLFIVLFHSFSGEPRNHFIFSRQLVVFLTNT 361
           LL ++AS     + C + + +F  ++      P+N       L+  LTNT
Sbjct: 242 LLMKIASQF-VGIFCSLYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNT 290


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -3

Query: 510 LLQRLASMC*YLVICQIVYTLFIVLFHSFSGEPRNHFIFSRQLVVFLTNT 361
           LL ++AS     + C + + +F  ++      P+N       L+  LTNT
Sbjct: 67  LLMKIASQF-VGIFCSLYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNT 115


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 499 TLEQIEKFDDPRSDDEDEEGKAYGGL 576
           +LE  +   DP  DD+ ++    G L
Sbjct: 226 SLEDDDNISDPEDDDDKDQDMDEGDL 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,077
Number of Sequences: 336
Number of extensions: 2885
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)