Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P18
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 86 3e-17
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 38 0.008
01_06_1058 - 34147025-34147069,34147190-34147339,34147983-341481... 33 0.16
04_04_0529 - 25997736-25998055,25998441-25998804,25999563-259996... 31 0.65
11_06_0500 + 24362627-24362828,24363046-24363704,24364958-243653... 30 1.5
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 30 1.5
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 29 2.6
03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495 29 2.6
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 29 4.6
08_01_0626 - 5445676-5446687,5447099-5447430 29 4.6
08_01_0397 - 3509186-3510291,3510322-3512335 28 6.1
03_06_0195 + 32256771-32258792 28 6.1
03_06_0146 - 31976538-31978643,31978653-31978751 28 6.1
03_02_0671 + 10315260-10315370,10315984-10316027,10316141-103162... 28 6.1
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 28 8.0
04_03_0777 - 19492053-19492091,19492356-19492934 28 8.0
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101... 28 8.0
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 85.8 bits (203), Expect = 3e-17
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = +1
Query: 190 NPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIG 369
NPFE +R K VLGKK K ++ G +R++A+ KR+ TL E + K++ F DRRIG
Sbjct: 57 NPFEAIWSRRKFDVLGKKRKGEERRIGRARSEAIHKRENTLLKEFEQSAKSSVFQDRRIG 116
Query: 370 EKNNQLSAEDKMIARFAAERVKQHNKKSIYNLAD---DEILTHRGQTLEQIEKFDD--PR 534
E++ L DK+I R E + + ++S YNL+D DE+ H +L + FD+ P
Sbjct: 117 ERDETLPEFDKVILRQQREHMAKLKRESKYNLSDDEEDEVDVHLPHSLSGKDDFDEEVPL 176
Query: 535 SDDEDEEG 558
D DEEG
Sbjct: 177 DDYSDEEG 184
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +1
Query: 238 KKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARF 417
KK K DKG S K+ +K K LG + + D + +KN++ +ED A++
Sbjct: 224 KKGKKDKGSDAKSHGKSSRKIK--LGHD-----SDSDHDDNKKKKKNSRYGSEDDSEAKY 276
Query: 418 AAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKA 564
++ +H K S ++ DD H+ ++ + D SD E + A
Sbjct: 277 DEKKHSKHLKNSRHDTDDDSESDHKNAKCKKSSRHDS-ESDSESDHKNA 324
>01_06_1058 -
34147025-34147069,34147190-34147339,34147983-34148117,
34148391-34148449,34149142-34149258,34149448-34149625,
34149715-34149798,34150133-34150201,34150385-34150525,
34150781-34150873,34151338-34151466,34152033-34152371,
34152624-34152674
Length = 529
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 214 REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMK-LMNKTNTFIDR---RIGEKNN 381
R ++ V K K +KGL G S+ KR+E + + L+ K +D R+ +N
Sbjct: 105 RRRLSVRDLKEKFEKGLSGASKLSEEAKRREAASLDRQVLLKKLRDVLDTLKGRVAGRNR 164
Query: 382 QLSAEDKMIARFAAERVKQHNKKSIYNLAD 471
+ E + A ++ Q + IY A+
Sbjct: 165 DDADEAISLVEALAVQLTQREGELIYEKAE 194
>04_04_0529 - 25997736-25998055,25998441-25998804,25999563-25999675,
25999880-25999989,26000155-26000311,26000390-26000915,
26001101-26001265,26002470-26002589,26003022-26003093,
26003422-26003499,26003965-26004057,26004491-26004647,
26005351-26005589,26006907-26007050,26007637-26007666,
26010610-26010993,26011486-26011554,26012353-26012418,
26013166-26013255,26013583-26013628,26014318-26014419,
26014552-26014694
Length = 1195
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 172 INKKKINPFEVHVNREKIKVLGKKSKHD 255
INK++I+ F VHV+ E + LG KS+ D
Sbjct: 1078 INKQEIDDFTVHVDSENLVPLGNKSEID 1105
>11_06_0500 +
24362627-24362828,24363046-24363704,24364958-24365300,
24366227-24366645
Length = 540
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 214 REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRR--IGEKNNQ- 384
R +I +G + +G+ V + ++ T+ +E + K ++ +G K+ +
Sbjct: 394 RNEILRIGGSDEMQQGVK-VDTTRVIENTASTVDSETPVEQKRRKKVETEYVLGGKDLEF 452
Query: 385 -LSAEDKMIARFAAERVKQHN--KKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 555
LS ED + F + +K ++ I N + + R E+ DDP SDD+D++
Sbjct: 453 ILSYEDDELETFDEDMLKDQAMVRQQIENFGYGFLHSWREVICTDSEEEDDPVSDDDDDD 512
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -3
Query: 456 YTLFIVLFHSFSGEPRNHFIFSRQLVVFLTNTTINKCVCLIHQL 325
Y ++++H+F G P +H + R + +F + I C+ + +L
Sbjct: 3159 YDTTVMIWHAFRGRPSDHVVMERPVHIFCGHDDIITCLFVSTEL 3202
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 193 PFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLG 315
PF+V R +++ L S+ +G+PG + AKA E++G
Sbjct: 627 PFQVEKTRIQVQQLHNFSREQQGMPGPTTAKADLDIPESVG 667
>03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495
Length = 728
Score = 29.5 bits (63), Expect = 2.6
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 1/165 (0%)
Frame = +1
Query: 142 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTE 321
D S++ E N + PF+VH E + K G + + K E +
Sbjct: 423 DATGSRQFLETNYSNMEPFDVHATSEDEGDTSLEGLKQKVELGKKKMSILYKEFEAERSA 482
Query: 322 MKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEILTHRGQT 501
+ + R+ E+ + E R E+ H++++I L D +LT R +
Sbjct: 483 SAVAASEAMAMINRLQEEKASMHMEALQYLRMMEEQA-DHDQEAIERLND--LLTEREKE 539
Query: 502 LEQIE-KFDDPRSDDEDEEGKAYGGLXYDFVAEGHFGGGMLSKTD 633
+ +E + D+ R E G +DF +G G+L +D
Sbjct: 540 MLDLEAELDNYRRLHEP------FGCKFDF-TDGDMASGVLDSSD 577
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 349 FIDRRIGEKN--NQLSAEDKMIARFAAERVKQHNKKSIYNL 465
FI + E++ +L+ +D ++A+ E V +NKK +Y+L
Sbjct: 537 FIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNNKKGVYSL 577
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 460 NLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 555
N+ DDE G+ E+IE+ +D +DD+DEE
Sbjct: 220 NVDDDE---DEGEEDEEIEEDEDENNDDDDEE 248
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.3 bits (60), Expect = 6.1
Identities = 33/180 (18%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Frame = +1
Query: 142 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTE 321
++ H +++ + ++K E ++ + ++ + D+ R A ++ +E + +
Sbjct: 58 ERRHREKERDREERKAREREEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRD 117
Query: 322 MKLMNKTNTFIDR-RIGEKNNQLSA--EDKMIARFAAERVKQHNKKSIYNLADDEILTHR 492
K +++ R E S E++++ AER +Q K+ D+E+ T R
Sbjct: 118 RKRRRRSSHHHHHHRDAEPEGPASGAREEEVVDVEEAERRRQKKKEEEQKQLDEEMETRR 177
Query: 493 GQTLEQIE---KFDDPRSDDEDEEGKAYGGLXYDFVAEGHFGGGMLSKTDSKDGAKSHKD 663
+ E E + ++ + +++E G AE GG K + DG +S ++
Sbjct: 178 RRIKEWQEMKRREEETKRREQEEAGVGTSAAAAAAPAEAE-DGGNAGKKWTLDGEESDEE 236
>03_06_0195 + 32256771-32258792
Length = 673
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 466 ADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLXYDFVAEGHFG 609
+DDE ++ + ++ E+ D DE+EE + +GG YD + FG
Sbjct: 277 SDDEEDSYSDEEIDDEEESDCDEEIDEEEE-EEHGGNKYDAIDNESFG 323
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 466 ADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLXYDFVAEGHFG 609
+DDE ++ + ++ E+ D DE+EE + +GG YD + FG
Sbjct: 335 SDDEEDSYSDEEIDDEEESDCDEEIDEEEE-EEHGGNKYDAIDNESFG 381
>03_02_0671 +
10315260-10315370,10315984-10316027,10316141-10316204,
10316278-10316392,10316504-10316571,10316917-10317014,
10317543-10317657,10318425-10318641,10319541-10319667,
10319803-10319857,10319997-10320093,10320748-10320876,
10320964-10321097,10321660-10321746,10321998-10322069,
10322320-10322359,10322535-10322779,10323587-10323764,
10323931-10324136,10324681-10324977
Length = 832
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 441 VLFHSFSGEPRNHFIFSRQLVVFLTNTTINKCVCLIHQ-LHFCAQC 307
VL+ F E R + S +L + ++I+ C CLIHQ LH A C
Sbjct: 417 VLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQKLHMLAIC 462
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 283 KAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYN 462
KAV++ +E L + K++++ T + + D I + + N ++
Sbjct: 468 KAVERGRE-LHADFKIISRALTRKGTALAKIAKCFKDYDVAIETYQKALTEHRNPDTLKK 526
Query: 463 LADDEILTHRGQTLEQIEKFDDPRSDDEDEEG 558
L D EI + LEQ E +D +D+E E+G
Sbjct: 527 LNDAEIAK---KELEQQEYYDPKIADEEREKG 555
>04_03_0777 - 19492053-19492091,19492356-19492934
Length = 205
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 379 NQLSAEDKMIARFAAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEG 558
++ +AE+ AR AA++ K K + D+E G + + DD DD+DEEG
Sbjct: 47 DEAAAEEAARAR-AADKGKG---KMVVEDEDEEEEEGGGSDEDSSDDDDDDDDDDDDEEG 102
Query: 559 KAYGG 573
GG
Sbjct: 103 GGGGG 107
>02_04_0622 -
24508508-24508666,24509533-24509634,24510108-24510176,
24510294-24510362,24510428-24510502,24510584-24510688,
24511309-24511407,24511521-24513230,24513489-24513788,
24514748-24514846,24514962-24515079,24515166-24515251,
24515334-24515402,24515746-24515843,24516373-24516534,
24516779-24516787,24516970-24516991,24517620-24517712,
24517872-24517940,24518720-24518782,24518882-24519037,
24520895-24521230
Length = 1355
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 121 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK 240
+R+ LAD ++ ++I +K + P VH +E ++ + K
Sbjct: 237 ERSRSLADATCTQGDSDITEKPVEPIRVHSEKELLREMEK 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,923
Number of Sequences: 37544
Number of extensions: 287475
Number of successful extensions: 919
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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