Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P17
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 28 0.26
AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein. 27 0.60
AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein. 27 0.60
AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsiv... 26 1.1
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 25 1.8
L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7... 25 2.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 24 5.6
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 24 5.6
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 9.8
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.8
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 28.3 bits (60), Expect = 0.26
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 210 HLAEGSKYLSPANLERAFITAKGSVEETKR-RLERMFTSRGMMPELC 347
H + +L+P + R + S EETKR + E + + ++PELC
Sbjct: 1088 HTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELC 1134
>AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 27.1 bits (57), Expect = 0.60
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 303 LERMFTSRGMMPELCLNRTVEEFKDEW----EVVNYVPLPKICPSDRSRVMVTQFLTEKL 470
+ R T R ++ L L V+ +D E+ N++ PK+ +D S + QF+++
Sbjct: 3 IRRFGTLRPVLAVLLLLAKVQSIEDHLSTQPEITNHLDRPKVTMADNSSSLDAQFVSQS- 61
Query: 471 EKFSILAYFRL 503
F+ Y R+
Sbjct: 62 NSFATKLYQRI 72
>AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 27.1 bits (57), Expect = 0.60
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 303 LERMFTSRGMMPELCLNRTVEEFKDEW----EVVNYVPLPKICPSDRSRVMVTQFLTEKL 470
+ R T R ++ L L V+ +D E+ N++ PK+ +D S + QF+++
Sbjct: 3 IRRFGTLRPVLAVLLLLAKVQSIEDHLSTQPEITNHLDRPKVTMADNSSSLDAQFVSQS- 61
Query: 471 EKFSILAYFRL 503
F+ Y R+
Sbjct: 62 NSFATKLYQRI 72
>AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsive
protein 1 protein.
Length = 447
Score = 26.2 bits (55), Expect = 1.1
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 62 FSYGEVT--LPPPGNSDARGPAESTRTVRGSRCQFTERKFR 178
+S+GEV LP PGN++ +G R + +F FR
Sbjct: 343 YSFGEVCAKLPNPGNANLKGAEYPLRKINDPTKRFGPYAFR 383
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 25.4 bits (53), Expect = 1.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 96 VIVTQEDLQKARELYGVQDVNSLRES----LDILEKWLQKQPHLAEGSKYLSPANL 251
+I ++ QK ++ V+DV +S LD+LE+ L ++ L S+YL P N+
Sbjct: 75 LITLNKNPQKNKQFVYVEDVAQGVDSGLLDLDVLEQALFERLMLPNPSEYLIPNNI 130
>L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7
protein.
Length = 192
Score = 25.0 bits (52), Expect = 2.4
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 222 GSKYLSPANLER-AFITAKGSVEETKRRLERMFTSRGMMPELCLNRTVE-EFKDEWEVVN 395
GSK + N E AF T G + LE + + +L + R E EF ++ ++
Sbjct: 4 GSKVIKAGNGEPDAFETQIG---QAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIII 60
Query: 396 YVPLPKICPSDRSRVMVTQFLTEKLEKFS 482
YVP+PK + + T+ + E +KFS
Sbjct: 61 YVPVPK---QKAFQKVQTRLVRELEKKFS 86
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 120 QKARELYGVQDVNSLRESLDILEKWLQ 200
QK +ELY Q S S + +KW+Q
Sbjct: 370 QKRKELYAKQGRGSQFSSKEERDKWIQ 396
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 408 PKICPSDRSRVMVTQFLTEKLEK 476
P CP R R T+F T +LEK
Sbjct: 133 PNGCPRRRGRQTYTRFQTLELEK 155
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 57 SNLAMEKLPYHPLVIVTQEDLQK 125
+N A+EK+ Y LVI T E + K
Sbjct: 144 TNAALEKIEYIFLVIFTAECIMK 166
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 9.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 153 VNSLRESLDILEKWLQKQPHLAEGSKYLSPANLERAFITA 272
V L++ LD+ W+Q ++ +Y + A L A TA
Sbjct: 161 VRPLKKQLDLEAAWMQPSSTISLVERYDNNAQLSIALRTA 200
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,149
Number of Sequences: 2352
Number of extensions: 14185
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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