Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P16
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118335-1|AAM48364.1|  440|Drosophila melanogaster LD24788p pro...   199   3e-51
AE013599-3324|AAF46795.1|  440|Drosophila melanogaster CG6437-PA...   199   3e-51
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P...    30   2.9  
AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA...    29   6.8  

>AY118335-1|AAM48364.1|  440|Drosophila melanogaster LD24788p
           protein.
          Length = 440

 Score =  199 bits (486), Expect = 3e-51
 Identities = 90/143 (62%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
 Frame = +3

Query: 321 VYGFALFFIVAWICLWLIHIMALSYCKWKLHRTVDRSPPE-QPYPGVSILKPLTGVDPNL 497
           +YGFA FF+V W+  W++H++A+ Y ++KLH+   + P E QP PGVSILKPL GVDPNL
Sbjct: 8   LYGFAAFFMVFWLGTWMVHVIAICYGRYKLHKKSCKLPTEAQPLPGVSILKPLMGVDPNL 67

Query: 498 FSNLETFFLLDYPTYELLFCVENENDPAIMLVNSLLQKYPQVEARLFVGGLNVGVNPKIN 677
             NLETFF +DYP YELLFCVE++ DPAI LV  LL KYP V+A LFVGG +VGVNPKIN
Sbjct: 68  QHNLETFFTMDYPLYELLFCVEDKEDPAIQLVERLLAKYPLVDAALFVGGSDVGVNPKIN 127

Query: 678 NMQQGYIAAKYPLIVISDAGIRM 746
           N+  GY+AAKY  ++ISD+GI+M
Sbjct: 128 NIHPGYMAAKYDFVMISDSGIKM 150


>AE013599-3324|AAF46795.1|  440|Drosophila melanogaster CG6437-PA
           protein.
          Length = 440

 Score =  199 bits (486), Expect = 3e-51
 Identities = 90/143 (62%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
 Frame = +3

Query: 321 VYGFALFFIVAWICLWLIHIMALSYCKWKLHRTVDRSPPE-QPYPGVSILKPLTGVDPNL 497
           +YGFA FF+V W+  W++H++A+ Y ++KLH+   + P E QP PGVSILKPL GVDPNL
Sbjct: 8   LYGFAAFFMVFWLGTWMVHVIAICYGRYKLHKKSCKLPTEAQPLPGVSILKPLMGVDPNL 67

Query: 498 FSNLETFFLLDYPTYELLFCVENENDPAIMLVNSLLQKYPQVEARLFVGGLNVGVNPKIN 677
             NLETFF +DYP YELLFCVE++ DPAI LV  LL KYP V+A LFVGG +VGVNPKIN
Sbjct: 68  QHNLETFFTMDYPLYELLFCVEDKEDPAIQLVERLLAKYPLVDAALFVGGSDVGVNPKIN 127

Query: 678 NMQQGYIAAKYPLIVISDAGIRM 746
           N+  GY+AAKY  ++ISD+GI+M
Sbjct: 128 NIHPGYMAAKYDFVMISDSGIKM 150


>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
            protein.
          Length = 1630

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +2

Query: 563  ERKRSGYNVSEQSPTEVSPSGSSLVRRRTECRSEPEDQQHATRIYRRQIPSYRNKRRRDP 742
            +R  S  N  E+       S SS  RRR+    E +D +   + YRR+   YR  RR DP
Sbjct: 901  DRSYSKENDEEEKIARRYRSESS-PRRRSR---ENDDYEDTAKSYRRESDKYRKPRREDP 956

Query: 743  N 745
            +
Sbjct: 957  D 957


>AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA
           protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 587 VSEQSPTEVSPSGSSLVRRRTECRSEPEDQQHATRIYRRQIPSYRNKRRRDPNA 748
           +S+ S T  S SGS    R  +  S+   Q  A +++ R +PS R  RRR  +A
Sbjct: 44  ISDSSTTTAS-SGSPTRHRSCDSLSK-SSQAEAGKLFPRNMPSIRRSRRRAVSA 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,073,456
Number of Sequences: 53049
Number of extensions: 692662
Number of successful extensions: 1988
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)