Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P13
(837 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0) 120 2e-27
SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 1e-25
SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09) 63 2e-10
SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15) 60 2e-09
SB_54473| Best HMM Match : DLIC (HMM E-Value=0) 46 4e-05
SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05) 40 0.003
SB_34778| Best HMM Match : Ank (HMM E-Value=0) 32 0.66
SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05) 29 3.5
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 28 8.2
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)
Length = 291
Score = 120 bits (288), Expect = 2e-27
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Frame = +2
Query: 179 WGY-RASDQRRWAVLHPACGGRQQSPIAISARQA-IPISIPAIELIGYQNPLPGPLTITN 352
W Y A+ W P CGG++QSPI I+ +A S+ ++ I Y N L + +
Sbjct: 33 WSYDEATGPSTWPNHFPHCGGKKQSPININTEEAKYDGSLTDLD-IRYPNTTD-VLLVNH 90
Query: 353 TGHSVALTIPKYTSEEEKKGFRLPYIF-GGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDM 529
GH++ I +SE P++ G L + Y + HFH G + +GSEH ++ +
Sbjct: 91 HGHAIEADI--LSSE--------PFVATGADLSSRYRLAQFHFHVGSSDIQGSEHHIHGV 140
Query: 530 RLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNS 709
+ PLEMH++H N KY N + A DGL V++ ++ D L+ I+ NL +
Sbjct: 141 KYPLEMHLVHYNDKYPNASSAQGLLDGLAVISVLFESSSTDNPALNEIIDNLQNASYKDE 200
Query: 710 TLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 835
+ + + + I+ DTE+FY Y GSLTTPPC E V W++
Sbjct: 201 EITVQNV-PVGKIIP-TDTEKFYRYNGSLTTPPCFETVKWIV 240
>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 114 bits (274), Expect = 1e-25
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 2/236 (0%)
Frame = +2
Query: 134 AVFTLVVINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPI-AISARQAIPISIPAIELI 310
A+ L ++ S+AA W Y + +W+ C G QSPI I++ A S+ ++ +
Sbjct: 415 ALVVLSLLGASLAADWDYDSKGPSKWSSSFSQCNGSSQSPIDIITSSVAFDQSLGELQFV 474
Query: 311 GYQN-PLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWG 487
+ P +++ N GH+ + + + + GG L Y H HWG
Sbjct: 475 NFDTIPTGSKISLKNNGHAFQVNMLSAGTFT---------VSGGGLGATYSTVQFHLHWG 525
Query: 488 DKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLS 667
KN +GSEH ++ +HI+ N KY N + A+ DGL V+ + V ++ L
Sbjct: 526 SKNEQGSEHLIDGKAFAGAIHIVSYNTKYPNISAAVDKSDGLAVVGILLK-VGTESAALK 584
Query: 668 PIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 835
++N+ ++ N++ + L +L + FY Y+GSLTTP C E VTW +
Sbjct: 585 KFMENIGSVTKVNTSDEFAQPAKLGDLLP--SNKNFYRYQGSLTTPGCQESVTWSV 638
>SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 68.9 bits (161), Expect = 5e-12
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 428 IFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKK-YRNTAEAM--Q 598
I GPL ++Y+ HFHWG GSEH ++ P EMHI+H N Y++ A AM
Sbjct: 2 ITSGPLSHKYKFAQFHFHWGKDEKEGSEHRVDGKMYPSEMHIVHYNSDLYKDAASAMSSD 61
Query: 599 HPDGLCVLAFFYQ 637
+ DGLCVL F +
Sbjct: 62 NKDGLCVLGVFLE 74
>SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)
Length = 252
Score = 63.3 bits (147), Expect = 2e-10
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Frame = +2
Query: 179 WGYRASDQ---RRWAVLHPACGGRQQSPIAISARQAI-PISIPAIELIGYQN-PLPGPLT 343
W Y S WA +PAC G QSPI I + S+ ++ + P +
Sbjct: 104 WNYNFSGPIGPDHWANRYPACNGSSQSPINIVTSSVMYDSSLGKLQFNNFDRIPSGAKIM 163
Query: 344 ITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLN 523
+ N GH A + T L Y+ GG L + H H G+ + RG+EH ++
Sbjct: 164 VRNNGH--AFQVNFMTPN-------LFYVHGGGLGANFTTAQFHMHLGEDDTRGAEHLID 214
Query: 524 DMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVL 622
R +HI++ N KY + + A DGL V+
Sbjct: 215 GQRNAACIHIVNYNTKYPDISTAANKSDGLAVI 247
>SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)
Length = 338
Score = 60.5 bits (140), Expect = 2e-09
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Frame = +2
Query: 209 WAVLHPACGGRQQSPIAISARQAIPISIPAIEL-IGYQNPLPG-PLTITNTGHSVALTIP 382
WA +P C G QSPI I + +S P + I + N G ++N G ++ +
Sbjct: 24 WASAYPECKGLAQSPINIVTSKVTRVSRPFRYMKINFNNYNGGLACFLSNDGKTLDFKV- 82
Query: 383 KYTSEEEKKGFRLPYIFGGPLD--NEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHII 556
++G +I D + Y+++ + FH+G + GSEH ++ R P E+ +I
Sbjct: 83 -------RQGLGQAFIDNPVEDPHDRYQLETVRFHFGCNDWLGSEHAVDGRRHPGEIQMI 135
Query: 557 HRNKKYRNTAEAMQHPDGLCVLAFF 631
N KY N ++A DGL V+A F
Sbjct: 136 FHNTKYSNVSDAADKSDGLLVVAAF 160
Score = 34.3 bits (75), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 773 FYTYKGSLTTPPCAEXVTWVI 835
+Y+YKGS T P C E V W+I
Sbjct: 176 YYSYKGSQTAPACHESVRWII 196
>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
Length = 1401
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +2
Query: 719 LPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 835
L FSL S+L +T+ F+ YKGSLTTPPC E VTW +
Sbjct: 725 LAQEFSLGSLLPS-NTD-FFRYKGSLTTPPCYESVTWTV 761
>SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05)
Length = 134
Score = 39.9 bits (89), Expect = 0.003
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +2
Query: 206 RWAVLHPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALTIPK 385
RW + QSPI I + S L P+ T+TN G ++ LT
Sbjct: 20 RWHKCYIGAEPGHQSPIDIVTKDVTQDSSLG-SLWNTYEPVANS-TLTNDGRTLQLTFAN 77
Query: 386 YTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHW-GDKNNRGSEHTLNDMRLPLEMHIIH 559
+ + GGPL +EY++ + FHW + + GSEH ++ +E++ +H
Sbjct: 78 NNN----------VLSGGPLTDEYQLAMIKFHWAATEESAGSEHMIDSQGHAIEVNALH 126
>SB_34778| Best HMM Match : Ank (HMM E-Value=0)
Length = 592
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 152 VINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPIAISARQAIPISI 292
V+ + G ++A D R W+ LH AC G + I + + + I++
Sbjct: 99 VLEFLLNEGGNFQAEDSRGWSALHHACKGGHSNIIEVLFHKGLDINV 145
>SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)
Length = 449
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 677 KNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSL 796
+ ++ I+N L+ P SL + G D RFY YKGS+
Sbjct: 248 RTISDIQNIAYLLEAPGMLSLKRDM-GFDQMRFYCYKGSV 286
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 268 C*NRYGRLLTAATSRVQYRPTSLVGGPISP 179
C + R L ++ R + RP S+ GGP+SP
Sbjct: 745 CEDDTSRTLLESSKRKEERPHSICGGPLSP 774
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 751 QD*RQGESMRQLQSGVEVLDGR*VLHDRT*ELGIEFHNLIEEREHT*AIRVLHSFRGVSV 572
+D R G + R + + +E+ +L T GI+ HN E R + + VL SF ++
Sbjct: 258 RDTRAGCAQRHISANLEIRQTLLLLPVETRCSGIQSHNKTEHRSN---MAVLRSFLLLTA 314
Query: 571 FLIPMDDVHFQRKTH 527
L D + + K H
Sbjct: 315 ILFAADFAYAKNKYH 329
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,269,433
Number of Sequences: 59808
Number of extensions: 596979
Number of successful extensions: 1402
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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