Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P12
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical pr... 207 6e-54
Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical p... 207 6e-54
AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein. 207 6e-54
Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical pr... 171 6e-43
AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein. 171 6e-43
Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical pr... 158 5e-39
AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein. 158 5e-39
AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical... 145 4e-35
Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical pr... 143 1e-34
AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein. 143 1e-34
U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein ( Caeno... 102 3e-22
CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical ... 102 3e-22
AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein. 102 3e-22
CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical ... 101 8e-22
AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein. 101 8e-22
AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein. 100 1e-21
AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related ... 100 1e-21
AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein. 99 2e-21
AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related ... 99 2e-21
AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical... 99 3e-21
AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein. 99 3e-21
CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical ... 99 4e-21
AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein. 99 4e-21
CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical ... 97 1e-20
AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein. 97 1e-20
Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical ... 89 3e-18
U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related (u... 82 4e-16
AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein. 82 4e-16
Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical pr... 78 6e-15
AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein. 78 6e-15
AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein. 71 1e-12
AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related ... 71 1e-12
AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical... 67 2e-11
Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical pr... 66 4e-11
AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein. 66 4e-11
U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related (u... 65 6e-11
Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein. 54 9e-08
AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical ... 36 0.025
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.7
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 6.7
AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine re... 28 8.8
>Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical
protein F46A9.5 protein.
Length = 176
Score = 207 bits (506), Expect = 6e-54
Identities = 99/157 (63%), Positives = 115/157 (73%), Gaps = 3/157 (1%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQWATYH 334
SS NE+F+V + + S TI T P+ NV ++ILKKVI W +H
Sbjct: 20 SSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH 79
Query: 335 KDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 514
DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN
Sbjct: 80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 139
Query: 515 MIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
MIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WCE+
Sbjct: 140 MIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical
protein F46A9.5 protein.
Length = 176
Score = 207 bits (506), Expect = 6e-54
Identities = 99/157 (63%), Positives = 115/157 (73%), Gaps = 3/157 (1%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQWATYH 334
SS NE+F+V + + S TI T P+ NV ++ILKKVI W +H
Sbjct: 20 SSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH 79
Query: 335 KDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 514
DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN
Sbjct: 80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 139
Query: 515 MIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
MIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WCE+
Sbjct: 140 MIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein.
Length = 170
Score = 207 bits (506), Expect = 6e-54
Identities = 99/157 (63%), Positives = 115/157 (73%), Gaps = 3/157 (1%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQWATYH 334
SS NE+F+V + + S TI T P+ NV ++ILKKVI W +H
Sbjct: 14 SSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH 73
Query: 335 KDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 514
DP ED +N+EKRTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN
Sbjct: 74 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 133
Query: 515 MIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
MIKGK+PEEIR+TFNIKNDFT EE+Q+RKEN WCE+
Sbjct: 134 MIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 170
>Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical
protein F46A9.4 protein.
Length = 174
Score = 171 bits (415), Expect = 6e-43
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 4/158 (2%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQWATYH 334
SS +E+F+V + + S T+ T P+ NV ++ILKKVI W T H
Sbjct: 20 SSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINWCTKH 79
Query: 335 KDDPPLPEDDENKEKRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 511
+ DP +P +D EK+TD I WD FL +DQGTLFELILAANYLDIKGLLDV C++VA
Sbjct: 80 QSDP-IPTEDS--EKKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSVA 136
Query: 512 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
NMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC++
Sbjct: 137 NMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174
>AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein.
Length = 174
Score = 171 bits (415), Expect = 6e-43
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 4/158 (2%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQWATYH 334
SS +E+F+V + + S T+ T P+ NV ++ILKKVI W T H
Sbjct: 20 SSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINWCTKH 79
Query: 335 KDDPPLPEDDENKEKRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 511
+ DP +P +D EK+TD I WD FL +DQGTLFELILAANYLDIKGLLDV C++VA
Sbjct: 80 QSDP-IPTEDS--EKKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSVA 136
Query: 512 NMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
NMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC++
Sbjct: 137 NMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174
>Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical
protein F44G3.6 protein.
Length = 167
Score = 158 bits (383), Expect = 5e-39
Identities = 73/117 (62%), Positives = 91/117 (77%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
PL V S IL+K+I W +H DD P + DENK +T DIS WDA+F+KVDQGTLFE+IL
Sbjct: 54 PLQKVTSTILEKIITWCEHHADDEP-KKVDENK--KTVDISEWDAEFMKVDQGTLFEIIL 110
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
AANYLDI+GLLDVT + VANM+KGKTP +IR FNI+NDF+ E + ++KEN WCE+
Sbjct: 111 AANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167
>AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein.
Length = 167
Score = 158 bits (383), Expect = 5e-39
Identities = 73/117 (62%), Positives = 91/117 (77%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
PL V S IL+K+I W +H DD P + DENK +T DIS WDA+F+KVDQGTLFE+IL
Sbjct: 54 PLQKVTSTILEKIITWCEHHADDEP-KKVDENK--KTVDISEWDAEFMKVDQGTLFEIIL 110
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
AANYLDI+GLLDVT + VANM+KGKTP +IR FNI+NDF+ E + ++KEN WCE+
Sbjct: 111 AANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167
>AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical
protein Y60A3A.18 protein.
Length = 159
Score = 145 bits (351), Expect = 4e-35
Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLP-EDDENKEKRTDDISSWDADFLKVDQGTLFELI 451
PLP V SAIL+K+I W +H DD P E E K+T +IS WDA+F+KVDQGTLFE+I
Sbjct: 43 PLPKVTSAILEKIITWCEHHADDEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEII 102
Query: 452 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 625
LAANYLDI+GLL+VT + VANM+KGKTP ++R F I N F+ E + ++K N WCE+
Sbjct: 103 LAANYLDIRGLLEVTTQNVANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWCED 159
>Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical
protein F47H4.10 protein.
Length = 145
Score = 143 bits (347), Expect = 1e-34
Identities = 65/99 (65%), Positives = 78/99 (78%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
PL NV S I KKVI+W YH +D P P D+ +EKRTDDI WD +FLKVD+GTLFEL+L
Sbjct: 44 PLKNVTSEIFKKVIEWCEYHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKGTLFELVL 102
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 571
AA YLDIKGL +VTCK++AN IKGK+PEEIR FN+ N+
Sbjct: 103 AATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 141
>AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein.
Length = 144
Score = 143 bits (347), Expect = 1e-34
Identities = 65/99 (65%), Positives = 78/99 (78%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
PL NV S I KKVI+W YH +D P P D+ +EKRTDDI WD +FLKVD+GTLFEL+L
Sbjct: 43 PLKNVTSEIFKKVIEWCEYHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKGTLFELVL 101
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 571
AA YLDIKGL +VTCK++AN IKGK+PEEIR FN+ N+
Sbjct: 102 AATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 140
>U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein (
Caenorhabditis elegansSkp1p homolog mRNA, complete cds.
).
Length = 172
Score = 102 bits (245), Expect = 3e-22
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 604
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++
Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166
>CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical
protein C52D10.6 protein.
Length = 172
Score = 102 bits (245), Expect = 3e-22
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 604
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++
Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166
>AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein.
Length = 172
Score = 102 bits (245), Expect = 3e-22
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 604
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ ++
Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166
>CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical
protein C52D10.9 protein.
Length = 194
Score = 101 bits (241), Expect = 8e-22
Identities = 50/118 (42%), Positives = 71/118 (60%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NV ILK VI+W HK + LP +D++ K + + WD +FLK+D LF+LI+
Sbjct: 65 PITNVTGNILKMVIEWCEKHKGEA-LPVEDDSVPKNIN-VPEWDTNFLKIDNEVLFDLIV 122
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
A NYLD+ GL++ CK VANM GK+P+E+R F I D ++ KE E+K
Sbjct: 123 ACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein.
Length = 194
Score = 101 bits (241), Expect = 8e-22
Identities = 50/118 (42%), Positives = 71/118 (60%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NV ILK VI+W HK + LP +D++ K + + WD +FLK+D LF+LI+
Sbjct: 65 PITNVTGNILKMVIEWCEKHKGEA-LPVEDDSVPKNIN-VPEWDTNFLKIDNEVLFDLIV 122
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
A NYLD+ GL++ CK VANM GK+P+E+R F I D ++ KE E+K
Sbjct: 123 ACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein.
Length = 194
Score = 100 bits (240), Expect = 1e-21
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Frame = +2
Query: 161 QSSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATYHK 337
+SS +V+ + E K S T+ P+ NV I+K VI+W HK
Sbjct: 26 ESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEKHK 85
Query: 338 DDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 517
+ LP +D++ K + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VANM
Sbjct: 86 GET-LPVEDDSVPKNIT-VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANM 143
Query: 518 IKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
GK+P+E+R F I D ++ KE E+K
Sbjct: 144 AIGKSPDEMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180
>AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 7 protein.
Length = 194
Score = 100 bits (240), Expect = 1e-21
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Frame = +2
Query: 161 QSSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATYHK 337
+SS +V+ + E K S T+ P+ NV I+K VI+W HK
Sbjct: 26 ESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEKHK 85
Query: 338 DDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 517
+ LP +D++ K + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VANM
Sbjct: 86 GET-LPVEDDSVPKNIT-VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANM 143
Query: 518 IKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
GK+P+E+R F I D ++ KE E+K
Sbjct: 144 AIGKSPDEMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180
>AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein.
Length = 174
Score = 99 bits (238), Expect = 2e-21
Identities = 51/105 (48%), Positives = 66/105 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN ++KV +W H D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 65 PVTNVNGKTMEKVAEWCEKHNADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 122
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 589
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E
Sbjct: 123 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 167
>AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 14 protein.
Length = 197
Score = 99 bits (238), Expect = 2e-21
Identities = 51/105 (48%), Positives = 66/105 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN ++KV +W H D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 88 PVTNVNGKTMEKVAEWCEKHNADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 145
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 589
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E
Sbjct: 146 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 190
>AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical
protein Y105C5B.13 protein.
Length = 192
Score = 99.1 bits (236), Expect = 3e-21
Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +2
Query: 161 QSSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATYHK 337
+S+ VF + E K S T+ P+ NV ILK VI+W HK
Sbjct: 24 ESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHK 83
Query: 338 DDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 517
+ LP DD++ K + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA M
Sbjct: 84 GEA-LPVDDDSVPKHIT-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMM 141
Query: 518 IKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
GK+P+E+R F I D ++ KE E+K
Sbjct: 142 AIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178
>AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein.
Length = 192
Score = 99.1 bits (236), Expect = 3e-21
Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +2
Query: 161 QSSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATYHK 337
+S+ VF + E K S T+ P+ NV ILK VI+W HK
Sbjct: 24 ESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHK 83
Query: 338 DDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 517
+ LP DD++ K + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA M
Sbjct: 84 GEA-LPVDDDSVPKHIT-VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMM 141
Query: 518 IKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
GK+P+E+R F I D ++ KE E+K
Sbjct: 142 AIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178
>CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical
protein C52D10.8 protein.
Length = 172
Score = 98.7 bits (235), Expect = 4e-21
Identities = 52/110 (47%), Positives = 68/110 (61%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN + KV + HK D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 604
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ +K
Sbjct: 117 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQK 166
>AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein.
Length = 172
Score = 98.7 bits (235), Expect = 4e-21
Identities = 52/110 (47%), Positives = 68/110 (61%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NVN + KV + HK D +PED+ N K T I WD FLK++ LF+LIL
Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLIL 116
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 604
A+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+ +K
Sbjct: 117 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEETAQK 166
>CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical
protein C52D10.7 protein.
Length = 194
Score = 97.5 bits (232), Expect = 1e-20
Identities = 49/118 (41%), Positives = 70/118 (59%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NV ILK VI+W HK + LP +D++ K + + WD +FLK+D LF+LI+
Sbjct: 65 PITNVIGNILKMVIEWCEKHKGEA-LPVEDDSVPKHVN-VPEWDTNFLKIDNDVLFDLIV 122
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
A NYLD+ GL++ CK VA M GK+P+E+R F I D ++ KE E+K
Sbjct: 123 ACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein.
Length = 194
Score = 97.5 bits (232), Expect = 1e-20
Identities = 49/118 (41%), Positives = 70/118 (59%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ NV ILK VI+W HK + LP +D++ K + + WD +FLK+D LF+LI+
Sbjct: 65 PITNVIGNILKMVIEWCEKHKGEA-LPVEDDSVPKHVN-VPEWDTNFLKIDNDVLFDLIV 122
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 628
A NYLD+ GL++ CK VA M GK+P+E+R F I D ++ KE E+K
Sbjct: 123 ACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical
protein F13A7.9 protein.
Length = 195
Score = 93.9 bits (223), Expect = 1e-19
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATYHKD 340
S + F + + AK S+ + P+ V IL VI+W K+
Sbjct: 27 SEDKQEFTISAKAAKKSIVLNDVISRRAPEDSAPMAPIPVEKVTGDILNMVIKWCEQRKE 86
Query: 341 DPPLPEDDENKEKRTD--DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 514
D LP DD + K+ D D+ WDADFLK+ LF+LI+A N LD+ GL++ CK VA+
Sbjct: 87 DE-LPVDDGSIPKKIDKIDVPQWDADFLKISSDVLFDLIVACNELDVPGLMNYGCKMVAD 145
Query: 515 MIKGKTPEEIRKTFNI---KNDFTAAEE 589
M GK+PE++R + I K D AAE+
Sbjct: 146 MAAGKSPEDMRTIYGIPTDKQDADAAEK 173
>AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical
protein Y37H2C.2 protein.
Length = 199
Score = 89.4 bits (212), Expect = 3e-18
Identities = 43/105 (40%), Positives = 66/105 (62%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
PL V++ I +K+I++ + PL +I WD++FLK+DQ TLF+L+L
Sbjct: 98 PLTKVDAKIFEKIIEYCEHQGTPRPL---------LNGEIGEWDSEFLKLDQNTLFDLVL 148
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 589
AANYL+I+ L DVT + +ANM+K TP +IR F + N ++AE+
Sbjct: 149 AANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED 193
>U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 17 protein.
Length = 180
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFL-KVDQGTLFELI 451
P+ NV LK +I+W HK+D P E K+K+ I SWD FL ++ LF+LI
Sbjct: 69 PVNNVVGFTLKLLIEWCDKHKEDDPAIALAE-KDKKNICIPSWDRHFLSRLPMSNLFDLI 127
Query: 452 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 562
AA +LD+ GL++ CKTVAN KGK EE+R+ F I
Sbjct: 128 TAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
>AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein.
Length = 180
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFL-KVDQGTLFELI 451
P+ NV LK +I+W HK+D P E K+K+ I SWD FL ++ LF+LI
Sbjct: 69 PVNNVVGFTLKLLIEWCDKHKEDDPAIALAE-KDKKNICIPSWDRHFLSRLPMSNLFDLI 127
Query: 452 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 562
AA +LD+ GL++ CKTVAN KGK EE+R+ F I
Sbjct: 128 TAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
>Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical
protein R12H7.5 protein.
Length = 173
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = +2
Query: 290 NSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 469
+S+I++ VI+W YH D PL D + R D S WD F V+ G LF L+ A++ L
Sbjct: 58 HSSIVQAVIEWL-YHYQDNPLARRDS--KIRYHDFSEWDKQFFNVESGVLFALLNASHAL 114
Query: 470 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 589
++ L+++ C A +I+GK+ EEIRK + I++D EE
Sbjct: 115 GVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
>AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein.
Length = 173
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = +2
Query: 290 NSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 469
+S+I++ VI+W YH D PL D + R D S WD F V+ G LF L+ A++ L
Sbjct: 58 HSSIVQAVIEWL-YHYQDNPLARRDS--KIRYHDFSEWDKQFFNVESGVLFALLNASHAL 114
Query: 470 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 589
++ L+++ C A +I+GK+ EEIRK + I++D EE
Sbjct: 115 GVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
>AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein.
Length = 184
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/111 (33%), Positives = 60/111 (54%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ VN LK V++W +HK DP +PE + + WD F+ ++ L +L+
Sbjct: 65 PIEKVNGKTLKLVVEWCEHHKADP-VPEAYPSGNTV---LPVWDRKFVDIEHDALTDLVN 120
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 607
A+N+L++ LL CK +A + KG +PEE+R F I D + ++ KE
Sbjct: 121 ASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
>AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 15 protein.
Length = 184
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/111 (33%), Positives = 60/111 (54%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELIL 454
P+ VN LK V++W +HK DP +PE + + WD F+ ++ L +L+
Sbjct: 65 PIEKVNGKTLKLVVEWCEHHKADP-VPEAYPSGNTV---LPVWDRKFVDIEHDALTDLVN 120
Query: 455 AANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 607
A+N+L++ LL CK +A + KG +PEE+R F I D + ++ KE
Sbjct: 121 ASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
>AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical
protein F56B3.12 protein.
Length = 183
Score = 66.9 bits (156), Expect = 2e-11
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Frame = +2
Query: 164 SSXNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLP-NVNSAILKKVIQWATYHK 337
SS EV D+ + S TI T P+P + + L +I+W HK
Sbjct: 33 SSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWCDQHK 92
Query: 338 -DDPPLPEDDENKEKRTDDISSWDADFLKV-DQGTLFELILAANYLDIKGLLDVTCKTVA 511
DDP + + ++ K+K I SWD F V G L +I AA LDI GL++ +TVA
Sbjct: 93 GDDPEIAKAEKGKKKVV--IPSWDQHFFSVLPMGNLLAVIKAAYDLDITGLVNYGTQTVA 150
Query: 512 NMIKGKTPEEIRKTFNI 562
+ I GK+ EE+R+ F +
Sbjct: 151 SRINGKSAEEMREIFQL 167
>Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical
protein R12H7.3 protein.
Length = 182
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Frame = +2
Query: 287 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANY 466
+ + +++KVI+W +HK DPP E E T+DI WDA FL V LF++I AA
Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDES----EPETNDIPDWDASFLMVRHNMLFDIIRAARD 112
Query: 467 LDIKGLLDVTCKTVANMIKGKTPEEI 544
+ GL + C+ V G+ P EI
Sbjct: 113 FTVPGLFAMCCRVV-----GQNPREI 133
>AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein.
Length = 155
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Frame = +2
Query: 287 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANY 466
+ + +++KVI+W +HK DPP E E T+DI WDA FL V LF++I AA
Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDES----EPETNDIPDWDASFLMVRHNMLFDIIRAARD 112
Query: 467 LDIKGLLDVTCKTVANMIKGKTPEEI 544
+ GL + C+ V G+ P EI
Sbjct: 113 FTVPGLFAMCCRVV-----GQNPREI 133
>U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 16 protein.
Length = 181
Score = 64.9 bits (151), Expect = 6e-11
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 287 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLK-VDQGTLFELILAAN 463
V L +V++W H+DD + + WD +LK +D L +LI A+N
Sbjct: 74 VQGDTLNRVLEWCNNHRDDGKYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASN 129
Query: 464 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAE 586
L ++ L+D CKTVANM KGK P ++R+ F I D AE
Sbjct: 130 DLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTDEEEAE 170
>Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical
protein K08H2.1 protein.
Length = 176
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/103 (28%), Positives = 59/103 (57%)
Frame = +2
Query: 284 NVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAAN 463
++ S +L K+I+W +H+++ D++ +R +++WD F++ + L L AA
Sbjct: 52 SICSFVLVKIIEWCYHHRNE------DQDHAQRI--LTAWDVQFIRTNSAILLHLAEAAF 103
Query: 464 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 592
L+I GLLDV C+ V+ M+ G+T E++ + + ++E+
Sbjct: 104 RLEIVGLLDVACRAVSIML-GRTLNEVKLMLRVGGVESPSDEE 145
>AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein.
Length = 172
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/103 (28%), Positives = 59/103 (57%)
Frame = +2
Query: 284 NVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAAN 463
++ S +L K+I+W +H+++ D++ +R +++WD F++ + L L AA
Sbjct: 48 SICSFVLVKIIEWCYHHRNE------DQDHAQRI--LTAWDVQFIRTNSAILLHLAEAAF 99
Query: 464 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 592
L+I GLLDV C+ V+ M+ G+T E++ + + ++E+
Sbjct: 100 RLEIVGLLDVACRAVSIML-GRTLNEVKLMLRVGGVESPSDEE 141
>AL032639-1|CAA21638.1| 373|Caenorhabditis elegans Hypothetical
protein F18A11.5 protein.
Length = 373
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 275 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLK-VDQGTLFELI 451
P+PNV +K V+ W H+ + P S+W+ D++K +D+ L + I
Sbjct: 270 PVPNVKGITMKMVVTWCIRHRVEVP-------------STSTWEVDYVKSLDREELKDAI 316
Query: 452 LAANYLDIKGLLDVT 496
AA YL + L+++T
Sbjct: 317 WAAKYLRMPILINIT 331
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 434 TLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENE 613
TL ++I+ N +D ++DVT + + E + K ++ FT EE++ +KE +
Sbjct: 285 TLRDMIIRTNLID---MIDVTRNVHYENFRFRQMEGLPKNEKNRDPFTHLEEERRQKEQD 341
Query: 614 WCEEK*TI 637
E++ T+
Sbjct: 342 LDEKRNTL 349
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 338 DDPPLPEDDENKEKRTDDISSWD 406
DD + +DD+NK ++D WD
Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 338 DDPPLPEDDENKEKRTDDISSWD 406
DD + +DD+NK ++D WD
Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 374 EKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKG 526
E+ D+ D + K G +FE + A YLD LD T + + +M++G
Sbjct: 1707 EEEIDEGQEEDIEVPKA-MGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRG 1756
>AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine
receptor, class sx protein6 protein.
Length = 306
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -3
Query: 643 IYYGLLFFTPFILFTN--LIFFCSSEIILNVERFTDFFRSLSF 521
+ +G++FF + T+ ++ FC+ + LN+ T FFR + F
Sbjct: 133 VIFGIIFFIWGFIETDDEIVIFCNPPLGLNITASTWFFRYILF 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,730,908
Number of Sequences: 27780
Number of extensions: 308269
Number of successful extensions: 953
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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