Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P11
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-1|CAB01410.2|  329|Caenorhabditis elegans Hypothetical pr...    35   0.053
M74797-1|AAB88058.1|  329|Caenorhabditis elegans gut-specific cy...    35   0.053
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    31   0.66 
AF022970-4|AAB69898.1|  336|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so...    30   2.0  
U23511-10|AAC46789.3|  260|Caenorhabditis elegans Hypothetical p...    29   2.6  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    29   4.6  
AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical...    28   8.1  

>Z78012-1|CAB01410.2|  329|Caenorhabditis elegans Hypothetical
           protein C52E4.1 protein.
          Length = 329

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 40  HSGAGCRPVPVAPCLTSSRPRLTLHRSPTCS 132
           + GAGC+P P+APC + + P     ++P+CS
Sbjct: 178 YHGAGCKPYPIAPCTSGNCPE---SKTPSCS 205


>M74797-1|AAB88058.1|  329|Caenorhabditis elegans gut-specific
           cysteine protease-1 protein.
          Length = 329

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 40  HSGAGCRPVPVAPCLTSSRPRLTLHRSPTCS 132
           + GAGC+P P+APC + + P     ++P+CS
Sbjct: 178 YHGAGCKPYPIAPCTSGNCPE---SKTPSCS 205


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +1

Query: 100 RLTLHRSPTCSPILLDXSPDTLTGNTPKSVTAAES*EENSRTLTHVT---RFGQWTTWLT 270
           +L   RS T     +  SP ++T N PK+ T+     EN +T+ H T   RF   T+ L 
Sbjct: 301 KLRPSRSDTILSRSVSTSPSSVTDNIPKTSTSRIPSSENPKTMEHTTTSRRFPTQTSILR 360

Query: 271 RKASI 285
           ++  I
Sbjct: 361 KEHEI 365


>AF022970-4|AAB69898.1|  336|Caenorhabditis elegans Hypothetical
           protein F13A2.3 protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 100 RLTLHRSPTCSPILLDXSPDTLTGNTPKSVTAAES*EENSRTLTHVTR 243
           R   H +  C PI  D +P T   NTP + T  E+ E+     ++ TR
Sbjct: 94  RAPRHINIKCEPISDDENPTTANSNTPTTPTTPENTEDPFEGPSYATR 141


>Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical
           protein F58A4.1 protein.
          Length = 254

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 27/92 (29%), Positives = 41/92 (44%)
 Frame = +1

Query: 82  LTSSRPRLTLHRSPTCSPILLDXSPDTLTGNTPKSVTAAES*EENSRTLTHVTRFGQWTT 261
           ++++  RLT     T +PI    SP T T +T  S + + S   ++ T+T  TR    TT
Sbjct: 73  VSTTPERLTKPYEETDTPIPTHSSPSTST-STSTSTSTSTSTSRSTSTVTPTTRSSTTTT 131

Query: 262 WLTRKASIRY*ATCLQSTQLTLNPLPWLKTGT 357
             +   S     T   S Q+T   +P    GT
Sbjct: 132 ATSTPTSSSKATT--TSAQITQPEIPQAAPGT 161


>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
            homolog protein 1 protein.
          Length = 1493

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +1

Query: 331  PLPWLKTGTSSYTPRLLKSMPNIHILMKPAFLVNQPPSPKPP 456
            PLP      +S +P L    P     M P+  VN PP P PP
Sbjct: 1445 PLPPKSNRHNSNSPTLSSEQP-FEDPMSPSIFVNTPPPPLPP 1485


>U23511-10|AAC46789.3|  260|Caenorhabditis elegans Hypothetical
           protein C32D5.1 protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 103 LTLHRSPTCSPILLDXS-PDTLTGNTPKSVTAAES*EENSRTLTHVTRF 246
           +T  +S +C+ I L+ S P T +  TP S     + E+++  + +VT F
Sbjct: 180 VTCQQSTSCTSIQLNSSAPSTCSAKTPNSTANLPTSEKHADIIAYVTNF 228


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 397 CWACSSAILEYSWKCLSLAKATDSESAGCSGG 302
           C A S+A    +WK +  ++A +SE  GC  G
Sbjct: 12  CLALSAADCPAAWKAILNSQAEESEDNGCEAG 43


>AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical
           protein C05C8.7 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 201 VVRGKFAYVDPRHKVRTVDYVADKEGFHPILSDVPPEH 314
           V RG   Y+ P+H +R        EG+     ++ P+H
Sbjct: 396 VKRGDIFYIPPKHNIRFSSCSEPLEGYRTFSYEMGPDH 433


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,351,900
Number of Sequences: 27780
Number of extensions: 273448
Number of successful extensions: 991
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)