Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P10
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   301   2e-83
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.6  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    24   4.7  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   8.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  301 bits (738), Expect = 2e-83
 Identities = 143/185 (77%), Positives = 162/185 (87%)
 Frame = +3

Query: 48  IKASGAEADSFDPSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 227
           IKA   E D+F+  I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+PK 
Sbjct: 8   IKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQ 67

Query: 228 KAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI 407
           KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAI
Sbjct: 68  KAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAI 127

Query: 408 LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 587
           LEDLVFPAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEF
Sbjct: 128 LEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEF 187

Query: 588 PEPYL 602
           PE YL
Sbjct: 188 PENYL 192


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 619 VIG*VYK*GSGNSKVTSRPVSFLYTDWKV 533
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 384 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 554
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 384 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 554
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 466 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 314
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 536 LPVCIQEANGTRSYLRVPRTLFVNLAYD 619
           LPV  Q+   T     +PRT  V   YD
Sbjct: 46  LPVAYQQKAATSGPFHMPRTEHVGYTYD 73


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 281 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 195
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,605
Number of Sequences: 2352
Number of extensions: 12617
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)