Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P09
         (472 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    75   8e-13
UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.2  
UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin be...    31   9.7  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    31   9.7  
UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   9.7  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 74.9 bits (176), Expect = 8e-13
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +1

Query: 118 IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSQLTAAAMVAPTP 291
           IYGTGGLLTP+VAP+L                  YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 215

 Score = 32.7 bits (71), Expect = 4.2
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = +3

Query: 72  GASXCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNS-GRKHSRCCTSILRKFSGR-Q 245
           G      G  GR+        +    +G R+  + SGN  G+   R C     +  GR Q
Sbjct: 45  GEQSLAPGNSGRQITGKQKRSNNGQEAGQRSEPRHSGNERGKAEQRWCVDESNRRGGRSQ 104

Query: 246 HCVTVDCCCHGSPH 287
            CV     CHGSP+
Sbjct: 105 LCVAAAMRCHGSPN 118


>UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin beta
            2-like chain; n=1; Ornithorhynchus anatinus|Rep:
            PREDICTED: similar to laminin beta 2-like chain -
            Ornithorhynchus anatinus
          Length = 1850

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 279  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR 178
            YHGSS Q    A GH   +VCLC+ G A  R  R
Sbjct: 943  YHGSSCQ----ADGHTGQIVCLCAPGYAGSRCDR 972


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 84   CISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 185
            C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 974  CKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 82

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 186 SGRKHSRCCTSILRKFSGRQHCVTVDCCCHGSP 284
           SG     C       F G  HCV+  CCC+G P
Sbjct: 36  SGTYQIACVECPCDGFDGPCHCVSDGCCCNGGP 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,987,866
Number of Sequences: 1657284
Number of extensions: 6581809
Number of successful extensions: 13579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13575
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)