Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P09
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.6  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 262 STVTQCCRPLNFRSMLVQQRLCFLP 188
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 403 HRIDKFIKNLNA 368
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -1

Query: 139 TDPQCHILQHRRPRLPLMQXEAPCXFNFCAIRARRR 32
           T P   ++Q +RP  P  +  +    N   +R +R+
Sbjct: 37  TQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRK 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,506
Number of Sequences: 336
Number of extensions: 1759
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)