Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P08
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.4  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 273 IIDECCLQACTRDVLLSYC*TTVKYNQKFSQLLQ 374
           +I + CL      + +S   TTV+  Q+++QL+Q
Sbjct: 64  LIVQTCLDFLLLALNISTILTTVRKQQQWAQLIQ 97


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 231 CRSLHKPYHYYVSRLTFHL 175
           C +L + Y++Y   +TF++
Sbjct: 50  CYNLRRIYYFYCVSITFNV 68


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = +1

Query: 202 IVIWFMKTP------ACPNFSRLMLVKSEASST--NVVSKPAPGTSFCLTARRQLNITK 354
           + IWF+ T         P   + +L     S T   VV+  + GT+F L A+   N+TK
Sbjct: 49  LYIWFILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMTK 107


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = +1

Query: 202 IVIWFMKTP------ACPNFSRLMLVKSEASST--NVVSKPAPGTSFCLTARRQLNITK 354
           + IWF+ T         P   + +L     S T   VV+  + GT+F L A+   N+TK
Sbjct: 49  LYIWFILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMTK 107


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 237 ELLPADARKKRGIIDECCLQACT 305
           E LPA A K       CCL+ C+
Sbjct: 175 EDLPAAAGKASNGNKCCCLRTCS 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,800
Number of Sequences: 336
Number of extensions: 1750
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)