Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P08
         (452 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70683-4|CAC42282.1|  109|Caenorhabditis elegans Hypothetical pr...    36   0.010
AF070472-1|AAC33275.1|  109|Caenorhabditis elegans insulin-like ...    36   0.010
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily as...    27   4.8  
Z82082-7|CAE53735.1|   76|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ...    27   8.4  

>Z70683-4|CAC42282.1|  109|Caenorhabditis elegans Hypothetical
           protein F13B12.5 protein.
          Length = 109

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +3

Query: 117 SRRYCGRHLAQTMAVLCWG--IDEMSAEKRNSDMVYEDSGMPELLPADARKKRGIIDECC 290
           S R CG  L  T+  +C       ++A KR++D  Y  +          +K+ GI  ECC
Sbjct: 31  SIRLCGSRLTTTLLAVCRNQLCTGLTAFKRSADQSYAPTTRDLFHIHHQQKRGGIATECC 90

Query: 291 LQACTRDVLLSYC 329
            + C+   L ++C
Sbjct: 91  EKRCSFAYLKTFC 103


>AF070472-1|AAC33275.1|  109|Caenorhabditis elegans insulin-like
           peptide protein.
          Length = 109

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +3

Query: 117 SRRYCGRHLAQTMAVLCWG--IDEMSAEKRNSDMVYEDSGMPELLPADARKKRGIIDECC 290
           S R CG  L  T+  +C       ++A KR++D  Y  +          +K+ GI  ECC
Sbjct: 31  SIRLCGSRLTTTLLAVCRNQLCTGLTAFKRSADQSYAPTTRDLFHIHHQQKRGGIATECC 90

Query: 291 LQACTRDVLLSYC 329
            + C+   L ++C
Sbjct: 91  EKRCSFAYLKTFC 103


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 232 MPESS*TISLLRFSADISSMPQQSTAIV*ARCRPQ 128
           MP SS  I L  +  +++ +   STA+V  RC P+
Sbjct: 746 MPGSSLNICLQYYEEEVAELVCASTAVVCCRCSPE 780


>U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 224 protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 SRRYCGRHLAQTMAVLCWGIDEM 185
           ++ YCGRH A  +   C G DE+
Sbjct: 321 NKYYCGRHYADQLYPRCAGCDEL 343


>Z82082-7|CAE53735.1|   76|Caenorhabditis elegans Hypothetical
           protein ZC334.10 protein.
          Length = 76

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 114 GSRRYCGRHLAQTMAVLCWG 173
           G++R CGRHL   +  LC G
Sbjct: 23  GAQRRCGRHLVNFLEGLCGG 42


>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
           ligase protein 1,isoform a protein.
          Length = 1051

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 274 MPRFLRASAGRSSGMPESS*TISLLRFSADISSMPQ 167
           +PR++R    R  G P +S T   +  S D +S+P+
Sbjct: 147 LPRYIRQLNQRDFGSPSNSITNGYIPDSVDFNSLPR 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,574,639
Number of Sequences: 27780
Number of extensions: 164601
Number of successful extensions: 474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)