Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P06
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19) 99 2e-21
SB_27193| Best HMM Match : Metallophos (HMM E-Value=7.6e-11) 95 7e-20
SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11) 53 3e-07
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_7180| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_33321| Best HMM Match : Peptidase_M14 (HMM E-Value=3.4) 45 6e-05
SB_59151| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_34249| Best HMM Match : fn3 (HMM E-Value=0) 30 1.7
SB_28959| Best HMM Match : Metallophos (HMM E-Value=2.8) 30 2.3
SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0) 29 3.9
SB_16160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37) 28 9.1
>SB_33601| Best HMM Match : Metallophos (HMM E-Value=6.4e-19)
Length = 675
Score = 99 bits (238), Expect = 2e-21
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = +2
Query: 359 TQESTVEYG-EGI-MEKEATGSATLFTDGGKEKRSQWIHTVLLKDLKFNTRYVYHVGSVY 532
T S VE+G G + + + F G +KR+ WIH L+ L + Y Y G +
Sbjct: 4 TNNSFVEFGLRGQPLGSKVDAEVSKFRTCGVKKRTIWIHRAKLEGLVPSEGYDYRCGGDH 63
Query: 533 GWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLSYLQDEAERDHFDVILHVGDFAYDM 712
GWS +++F G DW A+YGD+G N +L+ LQ E + H+D ILH+GDFAYDM
Sbjct: 64 GWSAIYTFNASNAGSDWSPSFAVYGDLGVGNPMALAKLQREVQSGHYDAILHIGDFAYDM 123
Query: 713 DTEDARVG 736
++ ARVG
Sbjct: 124 ASDMARVG 131
>SB_27193| Best HMM Match : Metallophos (HMM E-Value=7.6e-11)
Length = 341
Score = 94.7 bits (225), Expect = 7e-20
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +2
Query: 509 VYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLSYLQDEAERDHFDVILH 688
VYH G GWSE F+FK G DW R AI+GD+GNKNA SL +LQ+E ++ +D I+H
Sbjct: 27 VYHCGGPDGWSEEFNFKARRDGVDWSPRLAIFGDLGNKNARSLPFLQEEVQKGDYDAIIH 86
Query: 689 VGDFAYDMDTEDARVG 736
VGDFAYD+ T + G
Sbjct: 87 VGDFAYDLFTNNGTYG 102
>SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11)
Length = 585
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 461 WIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPP-RGEDWLLRAAIYGDMG-NKNAHS 634
+IH VLL DLK ++ Y Y G+ G S+L +F T P D + +YGD G + +AH+
Sbjct: 243 FIHDVLLTDLKPSSLYYYQYGTDLGMSKLKNFTTAPLPNPDVSFKFLVYGDQGISADAHN 302
Query: 635 LS-YLQDEAERDHFDVILHVGDFAY 706
+ Y +E + +++H+GD AY
Sbjct: 303 TARYSLEEILYRNATMVIHLGDIAY 327
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 51.2 bits (117), Expect = 9e-07
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Frame = +2
Query: 284 QPEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEG-IMEKEATGSATLFTDGGK----- 445
+P H++ ++++ W + ++ V YGEG + EATG+ +
Sbjct: 465 EPLMGHLSLTGDPTEMRVMWIS-GTAEKPLVLYGEGPSVPLEATGTTRTYNASNMCGPPA 523
Query: 446 EKRSQW----IHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPR-GEDWLLRAAIYGD 610
W IH VLL LK +TRY Y GS +E SF+T PR G D + ++GD
Sbjct: 524 STDGYWDPGYIHDVLLTGLKPSTRYYYTYGSYKMLAEKHSFRTGPRIGPDASYKFNVFGD 583
Query: 611 MGNKNAHS-LSYLQDEAERDHFDVILHVGDFAYDM 712
MG A + ++ + ++ + H GD Y +
Sbjct: 584 MGILPAATPIANEMVKEAKNGSSFLFHNGDLGYGL 618
>SB_7180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 DIKITWSTFNDTQESTVEY---GEGIMEKEATGSATLFTDGGKEKRSQWIHTVLLKDLKF 496
++ +TW TF+ T S VEY G E +A G+ T F DGG R+ +IH V LK LK
Sbjct: 5 EMVVTWVTFDLTPHSIVEYNKQGYPKFELQANGTVTKFVDGGNLHRTIYIHRVTLKGLKP 64
Query: 497 NTRYV 511
YV
Sbjct: 65 TQAYV 69
>SB_33321| Best HMM Match : Peptidase_M14 (HMM E-Value=3.4)
Length = 203
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 25/102 (24%)
Frame = +2
Query: 464 IHTVLLKDLKFNTRYVYHVGSV-YGWSELFSFKTPPRG-----------------EDWLL 589
IH V L L+ NT+Y Y VG V S+ FSF T + W
Sbjct: 101 IHNVKLTGLQPNTKYYYKVGDVNQTMSDTFSFSTKENNIIYAKPTSTTRMQRMHFQAWTK 160
Query: 590 RAA-------IYGDMGNKNAHSLSYLQDEAERDHFDVILHVG 694
R+ +YGDMG NA SL L EA HF ++HVG
Sbjct: 161 RSTHCMSVVEVYGDMGYSNAVSLPQLVQEARDGHFQAVIHVG 202
>SB_59151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 29
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 611 MGNKNAHSLSYLQDEAERDHFDVILHVG 694
MG NA SL L EA HF ++HVG
Sbjct: 1 MGYSNAVSLPQLVQEARDGHFQAVIHVG 28
>SB_34249| Best HMM Match : fn3 (HMM E-Value=0)
Length = 2195
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +2
Query: 257 AVTYDCPYCQPEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEGIMEKEATGSATLFTD 436
++ +D Y +P I ++ N I+W+ F+DT + + +G + GSA +
Sbjct: 581 SIAFDNVYYKPVSI-LSVTASGNSANISWTAFHDTAHNGLY--QGFKIELYNGSAVVL-- 635
Query: 437 GGKEKRSQWIHTVL-LKDLKFNTRYV--YHVGSVYGWSELFSFKTP 565
+ ++W V L+ T V + + V WSE SF TP
Sbjct: 636 --DHRSAEWSTNVTGLRPFTNYTARVAPFTLEGVGNWSETVSFTTP 679
>SB_28959| Best HMM Match : Metallophos (HMM E-Value=2.8)
Length = 597
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 461 WIHTVLLKDLKFNTRYVYHVGSVYGW 538
++H VL+ DLK TRY Y GS W
Sbjct: 275 FLHDVLIADLKPATRYFYQYGSEEVW 300
>SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 785
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 82 SEINSASQLLLI*TRNA*RTHNRSCNKSLL*IKLSQQNGTILLIYVIQLFISFD-TESRR 258
+E + A ++ + T+N + NR+ S + + L Q+N + VI + D T S
Sbjct: 125 AESSVAPKIAINQTKNEENSSNRTRTPSPVVVDLRQKNKKKSQVIVIDSDDNDDVTCSNT 184
Query: 259 CNLRLSVLSAGTDS-YSIWRENQ*HQNNMVHFQRHSGVH 372
++ V+++G+DS +W +++ + +N V + ++GVH
Sbjct: 185 SPSQVQVITSGSDSDTDVW-DSEYYSDNEVIDETNTGVH 222
>SB_16160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 305 AFGEKTNDIKITWSTFNDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRSQWIHTVLLK 484
AFG ++N I +S F T ++ +A G +R+++ T L+
Sbjct: 81 AFGSESNSF-IGYSNFALAYVPTDKFSRWXFRFVCAATAATIVSGAMAERTEF-QTYLIY 138
Query: 485 DLKFNTRYVYHVGSVYGWSE 544
F T ++Y V S +GW E
Sbjct: 139 SF-FLTGFIYPVVSHWGWHE 157
>SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 184 LILFKVNFYYRSDYVSVTRYAFRLKVIVMHC*FQS 80
L F YY ++ RY RL +I +HC +Q+
Sbjct: 222 LSCFPEQKYYLDEFAYARRYLSRLSIIEIHCIWQT 256
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 507 TFTMLVLYTDGLSCFPSR-LLREAKTGYCGPLYTVIWAIKMLTPYH 641
T ++L Y D S PS LLR K PL T + A +L PY+
Sbjct: 19 TCSLLSPYYDPSSLLPSLPLLRPFKLAPFSPLTTALQACSLLFPYY 64
>SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37)
Length = 288
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 546 CFPSRLLREAKTGYCGPLYTVIWAIKMLTPYHT--CKMKLNG 665
C P++ R YC LY + A+KM HT CK K+ G
Sbjct: 161 CPPTQHKRPFHCKYCEKLYDSLGALKMHIRTHTLPCKCKICG 202
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,021,619
Number of Sequences: 59808
Number of extensions: 442209
Number of successful extensions: 1100
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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