Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P06
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 114 7e-26
AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical ... 88 5e-18
AL110479-14|CAB60319.1| 417|Caenorhabditis elegans Hypothetical... 81 8e-16
AL110479-5|CAB60314.2| 397|Caenorhabditis elegans Hypothetical ... 75 5e-14
Z99284-2|CAL49452.1| 546|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z92796-7|CAB63230.2| 546|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z75537-1|CAA99834.1| 455|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical p... 60 1e-09
Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical p... 60 1e-09
AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical ... 31 0.85
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 28 6.0
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 139 bits (337), Expect = 2e-33
Identities = 68/153 (44%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Frame = +2
Query: 284 QPEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEGI--MEKEATGSATLFTDGGKEKRS 457
QPEQIH+A+G ITW T++DT +S VEYG I +E G +F DG K
Sbjct: 94 QPEQIHLAYGGDPTSYSITWMTYDDTLKSIVEYGTDISDLEHSVEGRCAVFLDGQKHSVW 153
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSL 637
++IH V L L TRY YHVGS +GWS +F F ED A+YGD+G +N SL
Sbjct: 154 RYIHRVNLTGLVPGTRYFYHVGSDHGWSPIFFFTALKEREDGGFIYAVYGDLGVENGRSL 213
Query: 638 SYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
++Q A++ D++LHVGDFAY+MD + G
Sbjct: 214 GHIQKMAQKGQLDMVLHVGDFAYNMDESNGETG 246
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 114 bits (274), Expect = 7e-26
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Frame = +2
Query: 347 TFNDTQESTVEYGEGI--MEKEATGSATLFTDGGKEKRSQWIHTVLLKDLKFNTRYVYHV 520
T++DT +S VEYG I +E G +F DG K ++IH V L L TRY YHV
Sbjct: 2 TYDDTLKSIVEYGTDISDLEHSVEGRCAVFLDGQKHSVWRYIHRVNLTGLVPGTRYFYHV 61
Query: 521 GSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLSYLQDEAERDHFDVILHVGDF 700
GS +GWS +F F ED A+YGD+G +N SL ++Q A++ D++LHVGDF
Sbjct: 62 GSDHGWSPIFFFTALKEREDGGFIYAVYGDLGVENGRSLGHIQKMAQKGQLDMVLHVGDF 121
Query: 701 AYDMDTEDARVG 736
AY+MD + G
Sbjct: 122 AYNMDESNGETG 133
>AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical
protein Y105C5B.3 protein.
Length = 438
Score = 88.2 bits (209), Expect = 5e-18
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Frame = +2
Query: 290 EQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEGIMEKE----ATGSATLFTDGGKEKRS 457
EQ+H++ N++ +TW T N T+ G+ + A G+ T + D GK K
Sbjct: 22 EQVHLSLSGNPNEMVVTWLTQNPLPNVTLYALFGVSQDSLRFTAKGNTTGWADQGKHKTM 81
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMG-NKNAHS 634
++ H +++L Y Y VGS S +F F+ P + LRAAI+GD+ K S
Sbjct: 82 RYTHRATMQNLVPGQVYYYQVGSSQAMSSIFHFRQPDPSQP--LRAAIFGDLSIIKGQQS 139
Query: 635 LSYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ L + +++ DVI+H+GD AYD+ E+ G
Sbjct: 140 IDQLIEATKQNQLDVIIHIGDLAYDLHDENGATG 173
>AL110479-14|CAB60319.1| 417|Caenorhabditis elegans Hypothetical
protein Y105C5B.15 protein.
Length = 417
Score = 81.0 bits (191), Expect = 8e-16
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Frame = +2
Query: 290 EQIHIAFGEKTNDIKITWSTFNDTQEST--VEYG--EGIMEKEATGSATLFTDGGKEKRS 457
EQ+H++ K +++ +TW T T V YG + + A + T + D G
Sbjct: 23 EQVHLSLSGKMDEMVVTWLTQGPLPNVTPYVMYGLSKDALRWTAKATTTSWKDQGSHGYV 82
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMG-NKNAHS 634
++ H + + Y Y VGS S+++ F P + LRAAI+GD+ K A S
Sbjct: 83 RYTHRATMTKMVPGDTYYYKVGSSQDMSDVYHFHQPDPTQP--LRAAIFGDLSVYKGAPS 140
Query: 635 LSYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ L D +HFDVI+H+GD AYD+ ++ G
Sbjct: 141 IKQLTDATHDNHFDVIIHIGDIAYDLHDDEGNRG 174
>AL110479-5|CAB60314.2| 397|Caenorhabditis elegans Hypothetical
protein Y105C5B.7 protein.
Length = 397
Score = 74.9 bits (176), Expect = 5e-14
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = +2
Query: 290 EQIHIAFGEKTNDIKITWSTF----NDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRS 457
EQ+H++ K +++ +TW T N T + M A G T + D +
Sbjct: 22 EQVHLSLSGKPDEMVVTWLTQEPLPNVTPYAIFGLSSDAMRLTAKGITTGWADQ-ENGTM 80
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMG-NKNAHS 634
++ H ++++ Y Y VGS S ++ F+ P + LRAAI+GD+ K S
Sbjct: 81 RYTHRATMQNMVQGQTYYYQVGSSQAMSSIYHFRQPD--QSLALRAAIFGDLSVYKGQQS 138
Query: 635 LSYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ L + + + FD+I+H+GD AYD+ E+ G
Sbjct: 139 IDQLIEARKNNQFDIIIHIGDLAYDLQGENGATG 172
>Z99284-2|CAL49452.1| 546|Caenorhabditis elegans Hypothetical
protein H25K10.1 protein.
Length = 546
Score = 74.5 bits (175), Expect = 7e-14
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Frame = +2
Query: 290 EQIHIAFGEKTNDIKITWSTF----NDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRS 457
EQ+H++ K +++ +TW T N T + + A G+ T + D G +
Sbjct: 21 EQVHLSLSGKADEMVVTWLTHDPLPNLTPYALFGLSRDALRFTAKGNTTGWADQGNGQM- 79
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMG-NKNAHS 634
++ H +++L Y Y VGS S +F+F+ P + + LRAAI+GD+ + +
Sbjct: 80 RYTHRATMQNLVQGKVYYYQVGSSQAMSSIFNFRQPDQFQP--LRAAIFGDLSVDIGQET 137
Query: 635 LSYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ YL +RD DVI+H+GD AY++ ++ G
Sbjct: 138 IDYLT--TKRDQLDVIIHIGDLAYNLHDQNGTTG 169
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +2
Query: 407 ATGSATLFTDGGKEKRSQWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWL 586
A G+ T++ D + + ++ H +++L Y Y VGS S +F+F+ P + +
Sbjct: 420 AKGNTTVWADQ-ENGQMRYTHRATMQNLVQGQVYYYQVGSSQAMSSIFNFRQPDQFQP-- 476
Query: 587 LRAAIYGDMG-NKNAHSLSYLQDEAERDHFDVILHVGDFA 703
LRAAI+GD+ +K ++ YL + +RD DVI+H+GD +
Sbjct: 477 LRAAIFGDLSFDKGQETIDYLTE--KRDQLDVIIHIGDIS 514
>Z92796-7|CAB63230.2| 546|Caenorhabditis elegans Hypothetical
protein H25K10.1 protein.
Length = 546
Score = 74.5 bits (175), Expect = 7e-14
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Frame = +2
Query: 290 EQIHIAFGEKTNDIKITWSTF----NDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRS 457
EQ+H++ K +++ +TW T N T + + A G+ T + D G +
Sbjct: 21 EQVHLSLSGKADEMVVTWLTHDPLPNLTPYALFGLSRDALRFTAKGNTTGWADQGNGQM- 79
Query: 458 QWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMG-NKNAHS 634
++ H +++L Y Y VGS S +F+F+ P + + LRAAI+GD+ + +
Sbjct: 80 RYTHRATMQNLVQGKVYYYQVGSSQAMSSIFNFRQPDQFQP--LRAAIFGDLSVDIGQET 137
Query: 635 LSYLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ YL +RD DVI+H+GD AY++ ++ G
Sbjct: 138 IDYLT--TKRDQLDVIIHIGDLAYNLHDQNGTTG 169
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +2
Query: 407 ATGSATLFTDGGKEKRSQWIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWL 586
A G+ T++ D + + ++ H +++L Y Y VGS S +F+F+ P + +
Sbjct: 420 AKGNTTVWADQ-ENGQMRYTHRATMQNLVQGQVYYYQVGSSQAMSSIFNFRQPDQFQP-- 476
Query: 587 LRAAIYGDMG-NKNAHSLSYLQDEAERDHFDVILHVGDFA 703
LRAAI+GD+ +K ++ YL + +RD DVI+H+GD +
Sbjct: 477 LRAAIFGDLSFDKGQETIDYLTE--KRDQLDVIIHIGDIS 514
>Z75537-1|CAA99834.1| 455|Caenorhabditis elegans Hypothetical
protein F18E2.1 protein.
Length = 455
Score = 72.1 bits (169), Expect = 4e-13
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +2
Query: 287 PEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGE--GIMEKEATGSATLFTDGGKEKRSQ 460
P+Q+HI+F ++ + W+TF++ + V YG+ A GS+ + GG ++
Sbjct: 24 PDQVHISFTGDMTEMAVVWNTFSEVSQD-VTYGKTGSGATSTAKGSSEAWVFGGI---TR 79
Query: 461 WIHTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLS 640
+ H ++ L+++T Y Y + S FSFKT + + ++GD+G + +S
Sbjct: 80 YRHKAIMTGLEYSTEYDYTIAS-----RKFSFKTLSN-DPQSYKVCVFGDLGYWHGNSTE 133
Query: 641 YLQDEAERDHFDVILHVGDFAYDMDTEDARVG 736
+ FD I+H+GD AYD+ T + +VG
Sbjct: 134 SIIKHGLAGDFDFIVHLGDIAYDLHTNNGQVG 165
>Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 60.5 bits (140), Expect = 1e-09
Identities = 42/150 (28%), Positives = 70/150 (46%)
Frame = +2
Query: 287 PEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRSQWI 466
PEQ+H+AF DI ++W TF + G+ + GG + S
Sbjct: 19 PEQVHLAFYTSPWDISVSWITFEN------------------GTTNTWIFGGITRHS--- 57
Query: 467 HTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLSYL 646
H V+LK+L +T+Y Y + S F+F+T P + + ++GD+G N S +
Sbjct: 58 HVVILKNLNPSTQYYYQIDS-----RKFNFRTLPT-DLTSYKVCVFGDLGVYNGRSTQSI 111
Query: 647 QDEAERDHFDVILHVGDFAYDMDTEDARVG 736
F I+H+GD AYD+ + + ++G
Sbjct: 112 IHNGIAGKFGFIVHIGDLAYDLHSNNGKLG 141
>Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 60.5 bits (140), Expect = 1e-09
Identities = 42/150 (28%), Positives = 70/150 (46%)
Frame = +2
Query: 287 PEQIHIAFGEKTNDIKITWSTFNDTQESTVEYGEGIMEKEATGSATLFTDGGKEKRSQWI 466
PEQ+H+AF DI ++W TF + G+ + GG + S
Sbjct: 19 PEQVHLAFYTSPWDISVSWITFEN------------------GTTNTWIFGGITRHS--- 57
Query: 467 HTVLLKDLKFNTRYVYHVGSVYGWSELFSFKTPPRGEDWLLRAAIYGDMGNKNAHSLSYL 646
H V+LK+L +T+Y Y + S F+F+T P + + ++GD+G N S +
Sbjct: 58 HVVILKNLNPSTQYYYQIDS-----RKFNFRTLPT-DLTSYKVCVFGDLGVYNGRSTQSI 111
Query: 647 QDEAERDHFDVILHVGDFAYDMDTEDARVG 736
F I+H+GD AYD+ + + ++G
Sbjct: 112 IHNGIAGKFGFIVHIGDLAYDLHSNNGKLG 141
>AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical
protein Y45F10B.11 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -1
Query: 199 FHFVGLILFKVNFYYRSDYVSVTRYAFRLKVIVMHC*FQS 80
FHFVG ++F +N YY + ++++ Y ++ +V+ F S
Sbjct: 261 FHFVGGLIFIINPYYTAYFIALRPYGNDIEFVVVPWIFYS 300
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 513 TMLVLYTDGLSCFPSRLLREAKTGYCGPLYTVIWAIKMLTPYHTCKMKLNGTTL 674
T+ ++ D S + R+ K G +Y V + L+P H +LN T+
Sbjct: 445 TVEIMSVDSCSLYEFRITAHNKFGESKAVYLVQYTEPQLSPQHILATRLNANTI 498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,416,067
Number of Sequences: 27780
Number of extensions: 339992
Number of successful extensions: 939
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -