Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P06
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.0  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   4.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   9.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.1  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +3

Query: 540 LSCFPSRLLREAKTGYCGPLYTVIWAIKML 629
           + C+  +  R+++  + GP+ ++  +IKML
Sbjct: 85  MDCYFRQSWRDSRLSFLGPIKSLSLSIKML 114


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 348 LSTTLRSPLWNMEKVLWKRKLQVQLLCSLMVVK 446
           +S++L+    +   V W+RK+ +++L SL   K
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATK 522


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 348 LSTTLRSPLWNMEKVLWKRKLQVQLLCSLMVVK 446
           +S++L+    +   V W+RK+ +++L SL   K
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATK 560


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +3

Query: 585 YCGPLYTVIWAIKMLTPYHT--CKMKLNG 665
           YC  +Y  + A+KM    HT  CK  L G
Sbjct: 21  YCEKVYVSLGALKMHIRTHTLPCKCHLCG 49


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 515 HVGSVYGWSELFSFKTPPRGEDWLLRAAIYGD 610
           H+G++Y      SF+   R ED  L    Y D
Sbjct: 107 HLGTLYPGMRAPSFRCTERPEDGALILHYYSD 138


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 599 IYGDMGNKNAHSLSYLQDEAER 664
           +YGD+ N    ++SY+ D   R
Sbjct: 360 VYGDLHNFGHVAISYIHDPDHR 381


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 515 HVGSVYGWSELFSFKTPPRGEDWLLRAAIYGD 610
           H+G++Y      SF+   R ED  L    Y D
Sbjct: 107 HLGTLYPGMRAPSFRCTERPEDGALILHYYSD 138


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 570 RGGVLKENSS 541
           RGGV++ENSS
Sbjct: 19  RGGVVRENSS 28


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/33 (21%), Positives = 17/33 (51%)
 Frame = +3

Query: 351 STTLRSPLWNMEKVLWKRKLQVQLLCSLMVVKR 449
           STT+   L+N+  + ++   +  + C   ++ R
Sbjct: 320 STTINPILYNLMSIKYRNAFKQTICCKTRIIGR 352


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 TWSTFNDTQESTVEYG 385
           +W+ +ND QE+   YG
Sbjct: 695 SWNKWNDWQETQNNYG 710


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 TWSTFNDTQESTVEYG 385
           +W+ +ND QE+   YG
Sbjct: 695 SWNKWNDWQETQNNYG 710


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 TWSTFNDTQESTVEYG 385
           +W+ +ND QE+   YG
Sbjct: 695 SWNKWNDWQETQNNYG 710


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 51  LLSSFGASQSL*NQQCITITF 113
           ++S FG   ++    C+TITF
Sbjct: 64  VISFFGCCGAIRESHCMTITF 84


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 36  LXRFPLLSSFGASQSL*NQQ 95
           L R PL+S F  S  L N+Q
Sbjct: 233 LFRIPLVSFFSTSPELSNKQ 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,243
Number of Sequences: 438
Number of extensions: 4022
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)