Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P04
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0B4Q9 Cluster: YadA C-terminal domain protein precurso... 35 1.8
UniRef50_UPI00015BCE1D Cluster: UPI00015BCE1D related cluster; n... 33 5.5
UniRef50_A6X7I0 Cluster: ABC transporter related precursor; n=1;... 33 7.3
UniRef50_Q7YU13 Cluster: LD26355p; n=3; Diptera|Rep: LD26355p - ... 33 9.7
UniRef50_Q5AU86 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_A0B4Q9 Cluster: YadA C-terminal domain protein precursor;
n=2; cellular organisms|Rep: YadA C-terminal domain
protein precursor - Burkholderia cenocepacia (strain
HI2424)
Length = 1417
Score = 35.1 bits (77), Expect = 1.8
Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 2/171 (1%)
Frame = -2
Query: 639 TVGXMCVGASVDLASSDFGVVASSFLASVDELVSLFLAASVWCSGTILVGSETGPXXXXX 460
+ G VG +V S SS S + VS + G++ G+
Sbjct: 329 STGLSDVGTTVASLSMSTAAGFSSLSTSTAQTVSSLSTGAASAIGSLSTGTAQAVTSLST 388
Query: 459 XXXXXXXXXXXXXXXLACSSGFTEAGTDDADTGVASV-TFSASGFTFLSSVLVSTAEVVF 283
A G G D T VAS+ T +A+GF+ LS+ STA+
Sbjct: 389 GLASNTANITSLSSSTASGFGSLSTGLSDVGTTVASLSTSTAAGFSSLST---STAQ--- 442
Query: 282 CFVG*TAVAFSSGLPGA*G-IS*GTGTVVPSWAPDCSASNAMHMASFSKQT 133
T + S+G A G +S GT V S + ASN + S S +
Sbjct: 443 -----TVSSLSTGAASAIGSLSTGTAQAVTSLSTGL-ASNTASITSLSSSS 487
Score = 33.9 bits (74), Expect = 4.2
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 9/182 (4%)
Frame = -2
Query: 651 ALACTVGXMCVGASVDLASSDFGVVASSFLASVDELVSLF------LAASVWCSGTILVG 490
A++ + + AS L+S G+ SS A+V L S L+ SV +GT L
Sbjct: 234 AVSSGLATLSTTASQSLSSLSTGL--SSNTANVTSLSSSAASSVGSLSTSVAGAGTALAS 291
Query: 489 SETGPXXXXXXXXXXXXXXXXXXXXLACS--SGFTEAGTDDADTGVASVTFSASGFTFLS 316
TG L+ S SGF T +D G + S S S
Sbjct: 292 LSTGIAQSATSLSTGLASNTANITSLSSSTASGFGSLSTGLSDVGTTVASLSMSTAAGFS 351
Query: 315 SVLVSTAEVVFCFVG*TAVAFSSGLPGA*G-IS*GTGTVVPSWAPDCSASNAMHMASFSK 139
S+ STA+ T + S+G A G +S GT V S + ASN ++ S S
Sbjct: 352 SLSTSTAQ--------TVSSLSTGAASAIGSLSTGTAQAVTSLSTGL-ASNTANITSLSS 402
Query: 138 QT 133
T
Sbjct: 403 ST 404
Score = 32.7 bits (71), Expect = 9.7
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 1/132 (0%)
Frame = -2
Query: 639 TVGXMCVGASVDLASSDFGVVASSFLASVDELVSLFLAASVWCSGTILVGSETGPXXXXX 460
+ G VG +V S+ SS S + VS + G++ G+
Sbjct: 412 STGLSDVGTTVASLSTSTAAGFSSLSTSTAQTVSSLSTGAASAIGSLSTGTAQAVTSLST 471
Query: 459 XXXXXXXXXXXXXXXLACSSGFTEAGTDDADTGVASV-TFSASGFTFLSSVLVSTAEVVF 283
A G G D T VAS+ T +A+G LSS+ STA+ +
Sbjct: 472 GLASNTASITSLSSSSASGLGSLSTGLSDIGTTVASLSTSTAAG---LSSLSTSTAQTIG 528
Query: 282 CFVG*TAVAFSS 247
TA A ++
Sbjct: 529 SLSTGTASAIAT 540
>UniRef50_UPI00015BCE1D Cluster: UPI00015BCE1D related cluster; n=1;
unknown|Rep: UPI00015BCE1D UniRef100 entry - unknown
Length = 583
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 176 EQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTS 295
+QSG+ +GT++ + IPQ P K + T QPT N+T+
Sbjct: 140 DQSGSVVGTSLQPIYIIPQQPPKATDLITYQQPTNLNSTA 179
>UniRef50_A6X7I0 Cluster: ABC transporter related precursor; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: ABC transporter
related precursor - Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168)
Length = 624
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -2
Query: 681 IPPTKLGPSNALACTVGXMCVGASVDLASSDFGVVASSFLASVDELVSLFLA 526
IP +LG S+A CT+G + + V +ASSDF + +F + V+L++A
Sbjct: 124 IPVARLGGSSASICTLGFLVIVHVVLVASSDFTRGSQTFF-GIPRAVNLWVA 174
>UniRef50_Q7YU13 Cluster: LD26355p; n=3; Diptera|Rep: LD26355p -
Drosophila melanogaster (Fruit fly)
Length = 1654
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 179 QSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 283
Q AQL TTVP+P + Q+P P N AVQ +Q
Sbjct: 1501 QKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534
>UniRef50_Q5AU86 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 236
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 594 SDFGVVASSFLASVDELVSLFLAASVWCSGTILVGSETG 478
+ +G+ S F+ASV + SLFL ++ W G+ LV + G
Sbjct: 171 ASYGMWLSRFIASVFAVASLFLRSTYWPQGSALVRGKDG 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,171,807
Number of Sequences: 1657284
Number of extensions: 8783760
Number of successful extensions: 26512
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26486
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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