Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P01
         (685 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila melanogast...    42   0.019
UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2; ...    34   2.8  
UniRef50_Q41DP0 Cluster: Putative uncharacterized protein precur...    34   3.7  
UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5; ...    33   4.9  
UniRef50_Q4UDC7 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  
UniRef50_Q6FN66 Cluster: Similar to tr|Q12482 Saccharomyces cere...    33   8.6  

>UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila
           melanogaster|Rep: Polyprotein - Drosophila melanogaster
           (Fruit fly)
          Length = 1053

 Score = 41.5 bits (93), Expect = 0.019
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +3

Query: 294 NTSSGTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 467
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 468 NTTRNKLLQEIKA 506
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 1289

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 166 LVFNKIMSTRKLTSEVRSGLYTHWRDVFEHVRS 264
           + FN ++   K+  E+   L THWRDV  H+++
Sbjct: 388 VTFNNLVDKIKVAGEITEMLITHWRDVVRHMKN 420


>UniRef50_Q41DP0 Cluster: Putative uncharacterized protein
           precursor; n=1; Exiguobacterium sibiricum 255-15|Rep:
           Putative uncharacterized protein precursor -
           Exiguobacterium sibiricum 255-15
          Length = 359

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +3

Query: 351 NVSVTSMEDLS----HEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKASAN 515
           N+SV+S +++S    H E++  YV+ ++   D  +  +  +NG TT  K L+ +K+ +N
Sbjct: 196 NLSVSSQDEISLLGIHNEVIVYYVMENINGTDVSKEKLYMSNGKTT--KRLKGLKSFSN 252


>UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 327

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 333 IRKSCNNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQ 494
           I ++ N  S+  ++     E + +YV  H   FDC   ++     N T+NK++Q
Sbjct: 171 IIENINKYSIDQIDKFEEIEHIITYVYFHNIHFDCMTENLVTFLENHTKNKIIQ 224


>UniRef50_Q4UDC7 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 891

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +3

Query: 348 NNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKASANLK*N 527
           N V+ T   ++++ +    + LAH + F    H+M + + N+  N + Q    S N    
Sbjct: 288 NTVANTPNSNVTNSKYTLDHQLAHNSSFVPNSHNMGYKSVNSVNNNISQS-NISQNTNIT 346

Query: 528 FDRNNGSVMTSG 563
            +  NGS   SG
Sbjct: 347 CNNVNGSTFVSG 358


>UniRef50_Q6FN66 Cluster: Similar to tr|Q12482 Saccharomyces
           cerevisiae YPR021c; n=1; Candida glabrata|Rep: Similar
           to tr|Q12482 Saccharomyces cerevisiae YPR021c - Candida
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 919

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 348 NNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFT-NGNTTRNKLLQEIKASANLK* 524
           N++      DL +E+++T +   H+AQFD  RH ++   N      KL    K SA++  
Sbjct: 257 NSLVTILQNDLKYEKMITGF--RHLAQFDASRHRLSLNKNQLVYLLKLFYSHKVSADIFE 314

Query: 525 NFDRNNGSVMTS 560
           + + +N  ++ S
Sbjct: 315 SLNLSNTKLIKS 326


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,595,376
Number of Sequences: 1657284
Number of extensions: 11604243
Number of successful extensions: 25551
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25539
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)