Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_P01
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   STALAWLHLLY 38
           S  +AWLHLLY
Sbjct: 624 SEQIAWLHLLY 634


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 357 RRYYTTYVCCIHVLV 313
           R+YY   VCC+++ +
Sbjct: 53  RKYYWLNVCCLNLSI 67


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 270 KKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAH 419
           + KH  +Q     TP+        S +  SV S    +  +IV   +L+H
Sbjct: 140 RMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIV-DRLLSH 188


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +3

Query: 270 KKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAH 419
           + KH  +Q     TP+        S +  SV S    +  +IV   +L+H
Sbjct: 131 RMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIV-DRLLSH 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,599
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)