Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_P01
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein p... 32 2.2
AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens ... 32 2.2
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 31 5.0
AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens ... 31 5.0
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 31 5.0
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 31 5.0
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 31 5.0
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 30 8.8
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 8.8
AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens ... 30 8.8
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 30 8.8
>BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein
protein.
Length = 541
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLTYAAFTFLWR 309
C ++ MTS+V++ N+SQN++ DD Q+F R D I + + FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213
>AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
).
Length = 541
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLTYAAFTFLWR 309
C ++ MTS+V++ N+SQN++ DD Q+F R D I + + FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 372
C +V MTS+V++ N+SQN++ DD Q+F
Sbjct: 16 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 49
>AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23293 fis, clone HEP10514. ).
Length = 579
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 372
C +V MTS+V++ N+SQN++ DD Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 372
C +V MTS+V++ N+SQN++ DD Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 372
C +V MTS+V++ N+SQN++ DD Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIF 372
C +V MTS+V++ N+SQN++ DD Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 protein.
Length = 4967
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4523 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4561
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4521 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4559
>AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ40269 fis, clone TESTI2026597. ).
Length = 567
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 473 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGNR---DVITRLTYAAFTFLWR 309
C ++ MTS+V++ ++SQN++ DD Q+F R D I + + FL R
Sbjct: 182 CATIFALSTMTSSVQIYSLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 239
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 297 TSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 413
++S + +E R S N VTS++ SH I YVL
Sbjct: 4523 STSSVVEGKELPTRSSSENAKVTSLDSSSHRIIAVHYVL 4561
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,310,103
Number of Sequences: 237096
Number of extensions: 1902958
Number of successful extensions: 6794
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6794
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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