Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_O21
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 119 2e-27
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 117 1e-26
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 117 1e-26
Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 30 1.9
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 29 3.4
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 29 3.4
AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 122 bits (294), Expect = 3e-28
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Frame = +2
Query: 416 SCRKVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIIT 586
S R++KE+V+ L+ K + E P+K F LKT KGTRDY P Q +RN+VL +
Sbjct: 30 SGRRIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTE 88
Query: 587 VFRRHGAECIDTPVFELKDVLTGKYGED-SKLIYDLKDQGGEILSLXYD 730
F R+GAE IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSL YD
Sbjct: 89 TFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 137
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 119 bits (286), Expect = 2e-27
Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Frame = +2
Query: 428 VKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRR 598
+KE+V+ L+ K + E P+K F LKT KGTRDY P Q +RN+VL + F R
Sbjct: 33 IKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNR 91
Query: 599 HGAECIDTPVFELKDVLTGKYGED-SKLIYDLKDQGGEILSLXYD 730
+GAE IDTPVFEL+DVL GKYGE+ KL+YDL+DQGGE+LSL YD
Sbjct: 92 YGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 136
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 117 bits (281), Expect = 1e-26
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +2
Query: 491 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 670
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 6 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 65
Query: 671 -SKLIYDLKDQGGEILSLXYD 730
KL+YDL+DQGGE+LSL YD
Sbjct: 66 GGKLVYDLQDQGGELLSLRYD 86
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 117 bits (281), Expect = 1e-26
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +2
Query: 491 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 670
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 17 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 76
Query: 671 -SKLIYDLKDQGGEILSLXYD 730
KL+YDL+DQGGE+LSL YD
Sbjct: 77 GGKLVYDLQDQGGELLSLRYD 97
>Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical
protein C11E4.8 protein.
Length = 209
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 562 ITYCHLLWVVVSCSLWCFKS 503
I YC ++W+V CS W +S
Sbjct: 42 IAYCEIMWIVSQCSFWTAES 61
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 440 VSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECI 616
+ + L L A L ++ Q + P G D + RN + + + RRHGA C+
Sbjct: 300 IGQTLVLLAGLCRQEEAEQLIRIVAPDGLSD---RAQECRNELRNAAVETIRRHGAACM 355
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +2
Query: 398 KNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDK 577
K + S ++E++++L + A+ T+ A QK ++ G + +++ + L
Sbjct: 144 KPILPSKMALLEEKIAQLESAMAE-ATDFAEHQKSKIQILDGKLEGADRKLISLQDQLST 202
Query: 578 IITVFRRHGAECIDTPVF--ELKDVLTGKYGEDSKLIYDLKDQGGEI 712
+ V + EC D V +L+D+L K E KL D+ D G+I
Sbjct: 203 LKEVNKAKVEECEDYRVHNNDLRDLLNEKEAELRKLHNDVVDLRGQI 249
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +2
Query: 398 KNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDK 577
K + S ++E++++L + A+ T+ A QK ++ G + +++ + L
Sbjct: 144 KPILPSKMALLEEKIAQLESAMAE-ATDFAEHQKSKIQILDGKLEGADRKLISLQDQLST 202
Query: 578 IITVFRRHGAECIDTPVF--ELKDVLTGKYGEDSKLIYDLKDQGGEI 712
+ V + EC D V +L+D+L K E KL D+ D G+I
Sbjct: 203 LKEVNKAKVEECEDYRVHNNDLRDLLNEKEAELRKLHNDVVDLRGQI 249
>AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical
protein F35B3.7 protein.
Length = 578
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 386 NCLTKNVTTSSC-RKVKEEVSKLLALKAQLVTEDAGPQKFTLKT---PKGTRDYNPQQMT 553
NC +N SSC R V+EE ++L+ QL E +LK+ P + N ++
Sbjct: 491 NCQRQNTAMSSCMRTVQEEKTRLMGKCIQLERELDNLHNVSLKSAGCPNCSVASNIEEKD 550
Query: 554 IRNNVLD 574
+R V D
Sbjct: 551 LRREVQD 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,165,410
Number of Sequences: 27780
Number of extensions: 330089
Number of successful extensions: 849
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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