Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O20
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124054-1|BAC85760.1|  130|Homo sapiens protein ( Homo sapiens ...    33   0.93 
BC023641-1|AAH23641.1|  645|Homo sapiens ZC3H14 protein protein.       31   2.8  
BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type c...    31   2.8  
AY578062-1|AAS90301.1|  571|Homo sapiens putative NY-REN-37 anti...    31   2.8  
AY578061-1|AAS90300.1|  579|Homo sapiens putative NY-REN-37 anti...    31   2.8  
AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 anti...    31   2.8  
AL834215-1|CAD38897.1|  571|Homo sapiens hypothetical protein pr...    31   2.8  
BC063835-1|AAH63835.1|  615|Homo sapiens VGF nerve growth factor...    30   4.9  
BC044212-1|AAH44212.1|  377|Homo sapiens VGF protein protein.          30   4.9  
AC004876-3|AAD45830.1|  615|Homo sapiens WUGSC:H_DJ0747G18.3 pro...    30   4.9  

>AK124054-1|BAC85760.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42060 fis, clone SYNOV2005448. ).
          Length = 130

 Score = 32.7 bits (71), Expect = 0.93
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 376 RLKAKIDEDMGMK--VLERPQ--FDVAPSVSSSRGPSKPPVDAIXEPAVRNFAAKDASPA 543
           RL+ K+   MG     LE+P       P  ++ R P  PP     +P+  + A   A PA
Sbjct: 25  RLQPKLARSMGQVPLCLEKPGALLPCPPEPTAGRTPPAPPHPVARDPSENSEAGPRAVPA 84

Query: 544 GPKPXG 561
           G +P G
Sbjct: 85  GARPVG 90


>BC023641-1|AAH23641.1|  645|Homo sapiens ZC3H14 protein protein.
          Length = 645

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 92  IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 132


>BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type
           containing 14 protein.
          Length = 736

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222


>AY578062-1|AAS90301.1|  571|Homo sapiens putative NY-REN-37 antigen
           isoform 3 protein.
          Length = 571

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 148 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 188


>AY578061-1|AAS90300.1|  579|Homo sapiens putative NY-REN-37 antigen
           isoform 2 protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222


>AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 antigen
           isoform 1 protein.
          Length = 736

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222


>AL834215-1|CAD38897.1|  571|Homo sapiens hypothetical protein
           protein.
          Length = 571

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 391 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIXEPAVRN 516
           IDED+   V E P     P+V+ + G S+P ++    PA RN
Sbjct: 148 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 188


>BC063835-1|AAH63835.1|  615|Homo sapiens VGF nerve growth factor
           inducible protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 301 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 474
           G  P V   R+ E  D+  + +  D   L A +     ++ L+RP    APS  S +GP 
Sbjct: 54  GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107

Query: 475 KPPVDAIXEPAVRNFAAKDASPAGPKP 555
           +   +A+    VR+      +P  P+P
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEP 134


>BC044212-1|AAH44212.1|  377|Homo sapiens VGF protein protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 301 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 474
           G  P V   R+ E  D+  + +  D   L A +     ++ L+RP    APS  S +GP 
Sbjct: 54  GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107

Query: 475 KPPVDAIXEPAVRNFAAKDASPAGPKP 555
           +   +A+    VR+      +P  P+P
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEP 134


>AC004876-3|AAD45830.1|  615|Homo sapiens WUGSC:H_DJ0747G18.3
           protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 301 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 474
           G  P V   R+ E  D+  + +  D   L A +     ++ L+RP    APS  S +GP 
Sbjct: 54  GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107

Query: 475 KPPVDAIXEPAVRNFAAKDASPAGPKP 555
           +   +A+    VR+      +P  P+P
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEP 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.141    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,288,395
Number of Sequences: 237096
Number of extensions: 1514940
Number of successful extensions: 4131
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4131
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)