Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_O19
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 31 0.25
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 31 0.25
SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|c... 30 0.43
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 27 2.3
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 3.1
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 27 3.1
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 3.1
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 27 4.0
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 26 7.1
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 26 7.1
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 9.4
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 25 9.4
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 521 VVGVDALKLKSLRHLGLIKGKAILRLLNKLEDARQANVSAVY---RCPISENKNKGSDIQ 691
++G+D+ LK L K +LR + +L+D+ + ++ Y PIS +++ S
Sbjct: 281 LLGLDSNVLKELNITSFGKRFEVLRKIQQLKDSYEQSLYEEYPQFAEPISVSQSSDSSSS 340
Query: 692 LEKNTPDESISLPGPSVP 745
+ K + DE+ P S P
Sbjct: 341 IPKKSNDEAGGSPSKSSP 358
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 0.25
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 723 EMDSSGVFFSNCMSLPLFLFSDIGQRYTADTFACLASSNLFSSLRMALPFIKPRCLNDFS 544
+ DSS V + N +S PL FSDI + F CL + + + + P CL D +
Sbjct: 106 DKDSSSVNYENQISKPLITFSDIHETVNV-PFLCLDKHDSKNEVAINSHEDSPVCLEDIT 164
>SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 326
Score = 29.9 bits (64), Expect = 0.43
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 491 NPCILYMRQEVVGV---DALKLKSLRHLGLIKGKAILRLLNKLEDARQANVSAVYRCPIS 661
N I+Y+RQE G+ + LK +L+ LG +A L LL D R V+ +
Sbjct: 200 NGVIIYLRQEGRGIGLSEKLKAYNLQDLGNDTVQANL-LLQHPADGRSYAVATAMLMDLG 258
Query: 662 ENKNKGSDIQLEKNTPDESISLPGPS 739
+ DI+L N P++ S+ GP+
Sbjct: 259 QR-----DIRLLTNNPEKVNSIEGPN 279
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 543 LRASTPTTSWRIYKIH-GFSNEPSSLGANCIIISYNAMFGLKSAVLLSPSSNIKPI 379
L S TT+ RI + + +SN+PS L + N++F + LSPSSN+ I
Sbjct: 123 LPQSDNTTTERIIENNPNYSNKPSKLKR--ALSGENSVFSIHQRNTLSPSSNLPRI 176
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +2
Query: 422 FNPNIALYDMIMQLAPNELGSLLNPCILYMRQEVVGVDALKLKSLRHLGLIKGKAILRLL 601
FN + L + I+ L P L + L +LY++ V +DAL + ++ ++ + ++ ++
Sbjct: 853 FNIKLDLRESIIGLNPRTLEAKL---LLYLKSLDVEIDALVASNPLNIRIMAAETVVYII 909
Query: 602 NKLEDA 619
+KL +
Sbjct: 910 DKLNQS 915
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 239 FQPSDYNLKFHNQIMDLTTTIRFSN 313
FQ + LK HN + + T +R+SN
Sbjct: 227 FQSDNCKLKSHNSLPSIRTNVRYSN 251
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.1 bits (57), Expect = 3.1
Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 452 IMQLAPNELGSLLNPCILYMRQEVVGVDALKLKSLRHLGLIKGKA--ILRLLNKLED--A 619
++ L NE N C ++ + + + S + LG + G+ I+ L ++++
Sbjct: 150 VLSLVTNEGTFACNVCGTELKDDEESAEMMS--SQKRLGKLMGQVNGIIDALKRVDEIVV 207
Query: 620 RQANVSAV--YRCPISENKNKGSDIQLEKNTPDESISLPGPSVPINFLSE 763
Q N + + P+S + S L K+ D +S PS+ ++F ++
Sbjct: 208 PQNNFQSALEHAVPVSLDTQNLSQQNLSKSNSDVRLSTSSPSITVDFSAD 257
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 321 IELHLKWLSVKQDERNQLSQL 383
+EL LKW+S + + RN LS +
Sbjct: 1339 VELPLKWMSTESNARNWLSSI 1359
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 399 SSNIKPIVTIDSSRLVSHSTISS 331
S N++P++ DS + HS ISS
Sbjct: 1101 SENVEPVLADDSDAVTIHSNISS 1123
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 531 TPTTSWRIYKIHGFSNEPSSLGANCIIISYNAMFGLKSAVLLSPSSN 391
TP +++ +G + P+ A +ISY + ++ A++L+ S++
Sbjct: 787 TPVVRPKLHNTYGLDHYPNGTNAVVAVISYTG-YDMEDAMILNKSAH 832
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 728 AMKWIHQXCSSLIVCHFLYFYFQILGNDIRQTHLLA*HLPTYL 600
A+ +I Q +SLI+ F I N ++Q +L LPT L
Sbjct: 2659 AVNYIPQAHASLILDQFNAILTTIFNNPLQQIEILENSLPTQL 2701
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 678 PLFLFSDIGQRYTADTFACLASSNLFSSLR--MALPFIKPRCLNDFSLR 538
P F FSDI +T + + + L A+P ++ RC + SLR
Sbjct: 456 PTFSFSDIKHAFTKPSLSDIQYWILVGERATWQAIPLLQVRCKTEISLR 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,092,788
Number of Sequences: 5004
Number of extensions: 63629
Number of successful extensions: 198
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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