Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O19
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012497-1|AAS93768.1|  478|Drosophila melanogaster GH28815p pro...   144   9e-35
AE014297-712|AAG22134.2|  478|Drosophila melanogaster CG33722-PC...   144   9e-35
AE014297-711|AAO41516.1|  478|Drosophila melanogaster CG33722-PB...   144   9e-35
AY119074-1|AAM50934.1|  137|Drosophila melanogaster LP09251p pro...    29   9.6  
AE014297-1274|AAF54619.1|  137|Drosophila melanogaster CG17721-P...    29   9.6  

>BT012497-1|AAS93768.1|  478|Drosophila melanogaster GH28815p
           protein.
          Length = 478

 Score =  144 bits (350), Expect = 9e-35
 Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
 Frame = +2

Query: 128 MSKXIIILTPNGRRHKVHCTPDTSMLQILEDACQKQGFQPSDYNLKFHNQIMDLTTTIRF 307
           M K + +L PNGRR  V+ T + ++L+ILE AC K G+   ++ LKFHN+++ LT   RF
Sbjct: 1   MDKRVTVLLPNGRRQNVNVTANMTLLEILETACFKHGYDAEEHCLKFHNKVVGLTQQFRF 60

Query: 308 SNVPNRATLEMVECETRREESIVTIGLMLEDGERRTADFNPNIALYDMIMQLAPNELGSL 487
           S +PN   LEM + E RR  S V + + L DG R+  DF+PN  ++ ++ +L    + + 
Sbjct: 61  SGLPNNCVLEMEQTEKRRTLSNVLVCVQLNDGSRQQGDFSPNDTIWLVVEKLCETHVKAY 120

Query: 488 LNPCILYMRQEVVGVDALKLKSLRHLGLIKGKAILRLLNKL-EDAR-QANVSAVYRCP 655
            +P I+YMR EV+G + ++  +L+ LG+++G+A++RL++K  ED + QAN   VY+ P
Sbjct: 121 ESPVIIYMRSEVIGHEQMRQTTLKSLGILEGRAMMRLIDKKPEDLKTQAN---VYKAP 175


>AE014297-712|AAG22134.2|  478|Drosophila melanogaster CG33722-PC,
           isoform C protein.
          Length = 478

 Score =  144 bits (350), Expect = 9e-35
 Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
 Frame = +2

Query: 128 MSKXIIILTPNGRRHKVHCTPDTSMLQILEDACQKQGFQPSDYNLKFHNQIMDLTTTIRF 307
           M K + +L PNGRR  V+ T + ++L+ILE AC K G+   ++ LKFHN+++ LT   RF
Sbjct: 1   MDKRVTVLLPNGRRQNVNVTANMTLLEILETACFKHGYDAEEHCLKFHNKVVGLTQQFRF 60

Query: 308 SNVPNRATLEMVECETRREESIVTIGLMLEDGERRTADFNPNIALYDMIMQLAPNELGSL 487
           S +PN   LEM + E RR  S V + + L DG R+  DF+PN  ++ ++ +L    + + 
Sbjct: 61  SGLPNNCVLEMEQTEKRRTLSNVLVCVQLNDGSRQQGDFSPNDTIWLVVEKLCETHVKAY 120

Query: 488 LNPCILYMRQEVVGVDALKLKSLRHLGLIKGKAILRLLNKL-EDAR-QANVSAVYRCP 655
            +P I+YMR EV+G + ++  +L+ LG+++G+A++RL++K  ED + QAN   VY+ P
Sbjct: 121 ESPVIIYMRSEVIGHEQMRQTTLKSLGILEGRAMMRLIDKKPEDLKTQAN---VYKAP 175


>AE014297-711|AAO41516.1|  478|Drosophila melanogaster CG33722-PB,
           isoform B protein.
          Length = 478

 Score =  144 bits (350), Expect = 9e-35
 Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
 Frame = +2

Query: 128 MSKXIIILTPNGRRHKVHCTPDTSMLQILEDACQKQGFQPSDYNLKFHNQIMDLTTTIRF 307
           M K + +L PNGRR  V+ T + ++L+ILE AC K G+   ++ LKFHN+++ LT   RF
Sbjct: 1   MDKRVTVLLPNGRRQNVNVTANMTLLEILETACFKHGYDAEEHCLKFHNKVVGLTQQFRF 60

Query: 308 SNVPNRATLEMVECETRREESIVTIGLMLEDGERRTADFNPNIALYDMIMQLAPNELGSL 487
           S +PN   LEM + E RR  S V + + L DG R+  DF+PN  ++ ++ +L    + + 
Sbjct: 61  SGLPNNCVLEMEQTEKRRTLSNVLVCVQLNDGSRQQGDFSPNDTIWLVVEKLCETHVKAY 120

Query: 488 LNPCILYMRQEVVGVDALKLKSLRHLGLIKGKAILRLLNKL-EDAR-QANVSAVYRCP 655
            +P I+YMR EV+G + ++  +L+ LG+++G+A++RL++K  ED + QAN   VY+ P
Sbjct: 121 ESPVIIYMRSEVIGHEQMRQTTLKSLGILEGRAMMRLIDKKPEDLKTQAN---VYKAP 175


>AY119074-1|AAM50934.1|  137|Drosophila melanogaster LP09251p
           protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 213 KICNMLVSGVQCTLCLLPLGVKMMI 139
           K+ N+ ++G  CT+CL PL V  M+
Sbjct: 80  KVVNVNIAGDLCTICLDPLSVYTMV 104


>AE014297-1274|AAF54619.1|  137|Drosophila melanogaster CG17721-PA
           protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 213 KICNMLVSGVQCTLCLLPLGVKMMI 139
           K+ N+ ++G  CT+CL PL V  M+
Sbjct: 80  KVVNVNIAGDLCTICLDPLSVYTMV 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,533,213
Number of Sequences: 53049
Number of extensions: 661245
Number of successful extensions: 1475
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)