Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O19
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical pr...    73   3e-13
Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z69789-5|CAL36496.1|  476|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z69789-1|CAA93650.2|  540|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical
           protein B0024.10 protein.
          Length = 552

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
 Frame = +2

Query: 200 MLQILEDACQKQGFQPSDYNLKFHN-QIMDLTTTIRFSNVPNRATLEMVECETRREESIV 376
           M Q+LE+AC K GF+ + + L+  + + +D +   R + + N ATLEM + E   E +I+
Sbjct: 3   MRQVLEEACLKSGFEVNSHRLQTQSRKPIDSSLPFRLTGLANNATLEMTQKEAVSENTII 62

Query: 377 TIGLMLEDGERRTADFNPNIALYDMIMQLA---PNELGSLLN---PCILYMRQEVVGVDA 538
            + +    G R       N  L D +         +L + ++   PCI+YM +   G + 
Sbjct: 63  ELAIQTASGARHQKKVGVNQMLLDALKSFTSEFKEDLATTIDGSVPCIVYMNKRYTGAE- 121

Query: 539 LKLKSLRHLGLIKGKAILRLLN-KLEDARQANVSAVYRCPISENKNKGSDIQLEK 700
           L + SL  LG+  GK ++R +  KL D   A + A  +      + K  D+   K
Sbjct: 122 LAVNSLSSLGVASGKCLIRHMRVKLSDQELATMQA--KLQEENERKKALDVNFVK 174


>Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical
           protein R11H6.5 protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = -2

Query: 489 SNEPSSLGANCIIISYNAMFGLKSAVLLSPSSNIKPIVTIDSSRLV 352
           + EP  +   C+I S+N    L   ++   S+ ++P++ +DS +++
Sbjct: 142 TGEPLQMEYGCLITSHNCQVRLLITIIPEESTKLEPLLHLDSKQMM 187


>Z69789-5|CAL36496.1|  476|Caenorhabditis elegans Hypothetical
           protein F17H10.3b protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 158 NGRRHKVHCTPDTSMLQILEDACQKQGFQPSD 253
           NG +  + C    S L+I++  C+K GF+  D
Sbjct: 128 NGEKTTIKCLVSDSTLEIMKIICEKLGFKNKD 159


>Z69789-1|CAA93650.2|  540|Caenorhabditis elegans Hypothetical
           protein F17H10.3a protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 158 NGRRHKVHCTPDTSMLQILEDACQKQGFQPSD 253
           NG +  + C    S L+I++  C+K GF+  D
Sbjct: 192 NGEKTTIKCLVSDSTLEIMKIICEKLGFKNKD 223


>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 383 GLMLEDGERRTADFNPNIALYDMIMQLAPNELGSLLNPC 499
           G+ + D E +    +  + L D  M ++  ELG LL PC
Sbjct: 138 GVDIGDVEEKARSVHVPVQLDDNAMSISERELGVLLGPC 176


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
           protein T28C6.9 protein.
          Length = 1861

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +2

Query: 212 LEDACQKQGFQPSDYNLKFHNQIMDLTTTI--RFSNVPNRATLEMVEC---ETRREE 367
           L+D  +K+  +  D +++   QI DLT     R +   N +   M EC   ETRREE
Sbjct: 723 LDDMVEKEKKRAIDLDVELQEQI-DLTDRAVRRAAEAENESNQRMAECLEKETRREE 778


>Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical
           protein ZK673.4 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 242 QPSDYNLKFHNQIMDLTTT 298
           QPSD  L+FHNQ  +L T+
Sbjct: 103 QPSDEQLRFHNQTTNLITS 121


>AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical
           protein M70.4 protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -2

Query: 777 VXAVGSDKKLMG-TEGPGNEMDSSGVFFSNCMSLPLFLFSDIGQRYTADTFACLASSNLF 601
           +  +G  K L+   +  G     S  ++ N  +LP  LF    +  +   FACL    LF
Sbjct: 45  IGGIGKPKSLVDQVQEEGGASSESKCYYDNQCTLPQMLFRVRSETDSQPPFACLNDIKLF 104

Query: 600 SS 595
            +
Sbjct: 105 DT 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,099,632
Number of Sequences: 27780
Number of extensions: 356773
Number of successful extensions: 876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)