Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O18
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 247 LLVLFLELYHSH*SLFRILWSLSRLRPDFLNMLQGLGCLFRPN 119
           + VLFL  +        IL  +  L P+FL + Q LG   R N
Sbjct: 89  MAVLFLGTFIGRAKFLAILKQMRNLEPEFLKLDQ-LGATVRNN 130


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 460 GLGEDIEKREKAMANLLVLAKENSGAEVMLKNGVVQRIQQLL---KVEKNSEIYINAIR 627
           G+GE IE        +  +  +N+   ++    +      L+   KVEK  EIY+ A+R
Sbjct: 431 GMGETIEDLLHFCRTMYSMKVDNAEYALLTAIVIFSERPALIEGWKVEKIQEIYLEALR 489


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = +1

Query: 322 KTIFTVDPTNKAVQPILSRLHT----VVQERARQNAQTS 426
           +TI+++ P  +  Q +L  LH+    V+ ER +  + +S
Sbjct: 222 ETIYSLTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSS 260


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = +1

Query: 322 KTIFTVDPTNKAVQPILSRLHT----VVQERARQNAQTS 426
           +TI+++ P  +  Q +L  LH+    V+ ER +  + +S
Sbjct: 222 ETIYSLTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSS 260


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 330 YCFGISVGFFKSLQTFKSLRSPEQGFRIFW 241
           Y + +  GF K  Q      +PE+  R FW
Sbjct: 110 YFWKMLTGFGKIEQVLPPHHAPEEKKRSFW 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,828
Number of Sequences: 336
Number of extensions: 2881
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)