Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O18
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    51   3e-08
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            51   3e-08

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
 Frame = +1

Query: 37  ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISD 216
           E  K +G+  F+  N+  AI+ Y+  I L    ++D      NR+AA+L  + +++   D
Sbjct: 284 EWLKQRGDTFFQQRNFLAAISAYSAGIRL----TKDYYALFLNRSAAHLALENYQRCAED 339

Query: 217 CDKALEIIPEDPKA--------LFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPIL 372
           C  ALE++    +A        L RR+ A   L   ++ Y +      +DP   +++  +
Sbjct: 340 CSTALELLQPPVEANRRARVACLARRAAALVKLGFLQQGYEEMIAASRLDPDEASLRLEV 399

Query: 373 SRLHTVVQERARQNAQTSN 429
            RL   ++E  +  +++ +
Sbjct: 400 DRLRRCIEEERKNRSESES 418


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
 Frame = +1

Query: 37  ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISD 216
           E  K +G+  F+  N+  AI+ Y+  I L    ++D      NR+AA+L  + +++   D
Sbjct: 284 EWLKQRGDTFFQQRNFLAAISAYSAGIRL----TKDYYALFLNRSAAHLALENYQRCAED 339

Query: 217 CDKALEIIPEDPKA--------LFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPIL 372
           C  ALE++    +A        L RR+ A   L   ++ Y +      +DP   +++  +
Sbjct: 340 CSTALELLQPPVEANRRARVACLARRAAALVKLGFLQQGYEEMIAASRLDPDEASLRLEV 399

Query: 373 SRLHTVVQERARQNAQTSNKVE 438
            RL   ++E  R+N   S   E
Sbjct: 400 DRLRRCIEEE-RENRSESESDE 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,415
Number of Sequences: 2352
Number of extensions: 11242
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)