Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_O18
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              27   0.21 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    24   1.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   7.7  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 18/85 (21%), Positives = 35/85 (41%)
 Frame = +1

Query: 49  NKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISDCDKA 228
           N+G      EN    I    K  N+ ++ +        +   A L   E ++++++C   
Sbjct: 48  NEGKINMDDENVLLFIECTMKKFNVVDENANFNEKISSDIVRAVLNDNEADQLLAECSPI 107

Query: 229 LEIIPEDPKALFRRSQAFECLERFE 303
                 DP AL + S+  EC  +++
Sbjct: 108 -----SDPNALIKISKILECFFKYK 127


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +1

Query: 460 GLGEDIEKREKAMANLLVLAKENSGAEVMLKNGVVQRIQQLL---KVEKNSEIYINAIR 627
           G+GE IE        +  +   N+   ++    +      LL   KVEK  EIY+ A+R
Sbjct: 451 GMGETIEDLLHFCRQMYAMKVNNAEYALLTAIVIFSERPNLLEGWKVEKIQEIYLEALR 509


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 132 FFGQIYRLSVKSDCLLIVFRFKSIVSFIFV 43
           F    YR   K++ L    RFK +   IFV
Sbjct: 44  FSKDFYRQDTKNNLLNAYVRFKLVTDCIFV 73


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 175 LRPDFLNMLQGL 140
           +RPDF+NML  L
Sbjct: 266 VRPDFINMLMEL 277


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 292 ERFEEAYRDAKTIFTVDPTNKAVQPI 369
           ER  +++ +A   F ++PT +  QP+
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPV 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,698
Number of Sequences: 438
Number of extensions: 3509
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)