Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_O17
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 243 1e-64
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 31 1.1
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.9
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 243 bits (594), Expect = 1e-64
Identities = 115/188 (61%), Positives = 136/188 (72%)
Frame = +2
Query: 74 GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 253
G VKV+K+K YFKRYQVK + RREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 2 GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61
Query: 254 CQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXX 433
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 62 AQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKG 121
Query: 434 XXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 613
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 122 HEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF 180
Query: 614 GYDAESKK 637
G+D ESK+
Sbjct: 181 GFDQESKE 188
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 624 QNPKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSF 728
Q K++NAE HR I G HVA+YM L+++DED +
Sbjct: 184 QESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRY 218
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 461 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 616
N EP++ G F C+L TT+G+R G + L + ++FPG
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPG 120
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 305 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 192
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 305 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 192
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 200 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 319
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical
protein C01C4.3a protein.
Length = 356
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 74 GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARK 172
GF+K+ +HKQ +R +KF R + K + R+
Sbjct: 25 GFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 57
>U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical
protein C01C4.3b protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 74 GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARK 172
GF+K+ +HKQ +R +KF R + K + R+
Sbjct: 138 GFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 170
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 347 SDQPSHHNVATHVNKQRTQYGHLQSESRP 261
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 347 SDQPSHHNVATHVNKQRTQYGHLQSESRP 261
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 347 SDQPSHHNVATHVNKQRTQYGHLQSESRP 261
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,636
Number of Sequences: 27780
Number of extensions: 340150
Number of successful extensions: 803
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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