Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_O13
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 36 0.044
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 34 0.13
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 31 0.71
Z83731-2|CAB06023.2| 450|Caenorhabditis elegans Hypothetical pr... 31 0.94
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 30 1.6
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.6
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 30 2.2
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 2.9
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 5.0
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81594-3|CAB76410.2| 441|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 28 6.6
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 28 6.6
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 28 6.6
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 6.6
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 28 6.6
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 28 6.6
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 28 6.6
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 6.6
Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 28 8.8
>AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical
protein Y55F3BL.1 protein.
Length = 419
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 389 DVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVT-QRK 565
D +I N V D++ AA + KFKFG + K + S ER LQR LVL+T +R
Sbjct: 19 DEEIGVTNAVREDDWKKAAEDLDKKFKFG----EFPPKNELKSVERELQRKLVLITAERC 74
Query: 566 LGNDSKT 586
+G S T
Sbjct: 75 IGELSGT 81
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 35.5 bits (78), Expect = 0.044
Identities = 26/129 (20%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 302 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFED----AANEEYSKFK 469
E E+S K + ++ KK A + ++++++ D++ K + AA EE +
Sbjct: 511 EVEESPKKKGKTPRKSSKKSAAVEESDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESS 570
Query: 470 FGNLET--DADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAER 643
+E D+ KK DKT + + + ++ GN+ + + + ++G+T R+++++
Sbjct: 571 DNEVEEVEDSPKKNDKTLRKSPRKPAAKVESEESFGNEEEEEVEESPKKKGKTPRKSSKK 630
Query: 644 IVKEQIGSE 670
++ E
Sbjct: 631 SAAKEESEE 639
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.13
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 257 LTEMQKKYKEFLFTVEFEK---SMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQ 427
L ++Q K + L VE K ++S ++ E +K AEL K+ + + K T
Sbjct: 189 LKDLQSKLERNLELVELNKLHEEVQSERLLKSEVAEKLAELIKSVKTSNSM-LLEKTT-- 245
Query: 428 DFEDAANEEYSKFKFGNLETDADKKGDKTSTERC 529
FEDA + + N E D D+T TE C
Sbjct: 246 QFEDAQGSRENVVEGANDEMDTSFASDETRTENC 279
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 542 LVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIG---SELQIKFISNAPCGFY 712
++L+ + K K +P G + GET+ + R VKE+ G +++ + G+Y
Sbjct: 90 VLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLSLQVQGSGWY 149
Query: 713 KYKYPSEMNG 742
+Y + + G
Sbjct: 150 RYAFYCNITG 159
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 31.5 bits (68), Expect = 0.71
Identities = 27/107 (25%), Positives = 46/107 (42%)
Frame = +2
Query: 263 EMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDA 442
E +KK +E +K K + ++END+K+ + + ++ D K +D +
Sbjct: 77 EKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTKTED-NEG 135
Query: 443 ANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSK 583
NEE K K E D+K K TE ++ + K+ D K
Sbjct: 136 KNEEKKKEK---KEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPK 179
>Z83731-2|CAB06023.2| 450|Caenorhabditis elegans Hypothetical
protein M04C9.4 protein.
Length = 450
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +2
Query: 254 PLTEMQKKYKEFLFTVE-FEKSMKSNHEIQHENDKKQAELFKAESQDVD-IDAVNKVTAQ 427
P +Q Y L +E +++ +++++ I + EL D D + N + ++
Sbjct: 29 PRRILQANYDSSLRQMEGYQEEIETDNPINESRGDEAEELENEGCDDRDRCTSRNSIDSE 88
Query: 428 DFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLV 547
+E++ E Y + + + E AD E CLQ H +
Sbjct: 89 IYENSDEEVYDESMYESEEEYADSPFIIDKMEECLQNHQI 128
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 308 EKSMKSNHEIQHENDKKQAELF-KAESQDVDIDAVNKVTAQDFEDAANEEYSKFK 469
EK+++ +H+ +N+K ELF K + D + VNK+ Q + + ++ S+ K
Sbjct: 162 EKTLQLSHDENLKNEKSNQELFAKQQDGDAQWETVNKLVDQQ-KSKSGKDLSRLK 215
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 227 IERLPVVTPPLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDA 406
IERL ++ E+ KK+K F E + + + KK A++ + Q ++I +
Sbjct: 32 IERLDILAKKEMEVAKKHKIEFFANYEEMTAEQKTKAFTFMQKKMAKVSEYSDQKIEIAS 91
Query: 407 VNKVTAQDFEDAANEEYSKF 466
KV +D EE KF
Sbjct: 92 GLKVLLKDVYGKFMEEEQKF 111
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 617 ETLRQTAERIVKEQIGSELQIKFISN-APCGFYKYKYPSEMNGKVGAK 757
E R E+IV ++ S L ++ AP + +Y PS+ NG G++
Sbjct: 150 EKTRMALEKIVNSKVASALPVRHADKLAPAQYIRYT-PSQQNGAAGSQ 196
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Frame = +2
Query: 293 FTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKF 472
F + ++ + E+Q + K+Q E ++ + + + K Q+ E NE++ K
Sbjct: 186 FPKQIPVAISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDFEKRNQ 245
Query: 473 GNLETDADKKGDKTSTERCL-----QRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTA 637
L+ + + K E+ + +R L + + KL +K Q E+ R+
Sbjct: 246 EKLKREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRKL 305
Query: 638 ERIVKE 655
E++ +E
Sbjct: 306 EKLKRE 311
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 263 EMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAES-QDVDIDAVNKVTAQDFED 439
E + + +E + + EK + + DKK+ + K + +D +++ + ++ +D
Sbjct: 215 EKEVEDEEAVEAKDEEKKEGEVENVADDADKKKTKKIKEKYFEDEELNKTKPIWTRNPDD 274
Query: 440 AANEEYSKFKFGNLETD 490
+NEEY++F + +L D
Sbjct: 275 ISNEEYAEF-YKSLSND 290
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 308 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANE----EYSKFKFG 475
EK+ K + + E + L + + D+ + + T+ +D N EY +
Sbjct: 201 EKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLD 260
Query: 476 NLETDADKKGDKTSTE 523
N+E D+KG K TE
Sbjct: 261 NIEKQKDRKGSKDETE 276
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 308 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANE----EYSKFKFG 475
EK+ K + + E + L + + D+ + + T+ +D N EY +
Sbjct: 201 EKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLD 260
Query: 476 NLETDADKKGDKTSTE 523
N+E D+KG K TE
Sbjct: 261 NIEKQKDRKGSKDETE 276
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 254 PLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDV 394
P+T K LFT++ E + K N E + E + A +++ D+
Sbjct: 88 PITPTSASLKLHLFTIKMEDNRKRNMERRRETSRHAARDRRSKESDI 134
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 254 PLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDV 394
P+T K LFT++ E + K N E + E + A +++ D+
Sbjct: 88 PITPTSASLKLHLFTIKMEDNRKRNMERRRETSRHAARDRRSKESDI 134
>Z81594-3|CAB76410.2| 441|Caenorhabditis elegans Hypothetical
protein T20F10.5 protein.
Length = 441
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 251 PPLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQD 430
P + + K L +VEFE S + + + E+ Q L ++ + + K+ +Q+
Sbjct: 280 PEIAKAVKSRSVDLKSVEFEVSTRRSAFVTREHAITQYHLVPVDNGE---ENAYKLVSQE 336
Query: 431 FEDAANEEYSKFK 469
F D A EY K +
Sbjct: 337 FVDGALSEYDKHR 349
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 263 EMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQD 430
EMQ+KYKE + EK + Q E+ KK EL A+ ++ + V + A++
Sbjct: 524 EMQRKYKE-----DLEKRQEEQKRQQEEHKKKIQELKAAQQRERERMMVEREKAEN 574
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 203 WDILTGICIERLPVVTPPLT 262
WD+ TG+CI+ LP + P++
Sbjct: 198 WDVKTGMCIKTLPAHSDPVS 217
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 287 FLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVD 397
FL + +K + N+ Q END K E+F+ + VD
Sbjct: 91 FLVIFDVQKEDEGNYYCQRENDSKWGEVFQLKIAYVD 127
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 561 RCVTRTRCRCKHRSVDVLSPFLSA-SVSKFPNLNFEYSSFAASSKSWAVTLL 409
+C+ +C+ SVD LS + A S PN+ Y+SF A + W V L
Sbjct: 137 KCINLEKCQT---SVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRL 185
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 561 RCVTRTRCRCKHRSVDVLSPFLSA-SVSKFPNLNFEYSSFAASSKSWAVTLL 409
+C+ +C+ SVD LS + A S PN+ Y+SF A + W V L
Sbjct: 137 KCINLEKCQT---SVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRL 185
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +2
Query: 257 LTEMQKKYKEFLFTVEFEKSMKSNHEIQHEND---KKQAELFKAESQDVDIDAVNKVTAQ 427
L E +K+ +E L E K E Q +D +KQ +L + E K+ A
Sbjct: 209 LEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEMKQQNQEREKLIAD 268
Query: 428 DFEDAANEEYSKFKFGNLETDADKKGDKTSTE 523
DFE E+ + K A + +K E
Sbjct: 269 DFEKRKLEKLQREKLFEKNKQAKLQREKAHQE 300
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 PPLTEMQKKYKEFLFTVEFEKSMKSNHEIQHEND--KKQAELFKAESQDVDIDAVNKVTA 424
PP E QKK K+ E E ++ E EN+ ++ E +A+++ + K A
Sbjct: 336 PPDPENQKKKKKLKKADESEDHEEAEEEEDKENEISVEEREARRAKNRKIREKKARKKAA 395
Query: 425 QDFEDAANE 451
Q+ AA E
Sbjct: 396 QEARQAAEE 404
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 254 PLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDV 394
P+T K LFT++ E + K N E + E + A +++ D+
Sbjct: 88 PITPTSASLKLHLFTIKMEDNRKRNMERRRETSRHAARDRRSKESDI 134
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 254 PLTEMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDV 394
P+T K LFT++ E + K N E + E + A +++ D+
Sbjct: 88 PITPTSASLKLHLFTIKMEDNRKRNMERRRETSRHAARDRRSKESDI 134
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 263 EMQKKYKEFLFTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQD 430
EMQ+KYKE + EK + Q E+ KK EL A+ ++ + V + A++
Sbjct: 524 EMQRKYKE-----DLEKRQEEQKRQQEEHKKKIQELKAAQQRERERMMVEREKAEN 574
>Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical
protein ZK863.3 protein.
Length = 547
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 575 DSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMNGKVGA 754
D K QG+ G L + AERI +E+ GS+ +I IS Y K E++G +
Sbjct: 484 DPKKFQHQGY---GSLLMEEAERIAREEHGSD-KIAVISGVGTREYYRKLGYELDGPYMS 539
Query: 755 KI 760
K+
Sbjct: 540 KM 541
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 8.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 203 WDILTGICIERLPVVTPPLTEM 268
WD TG+C++ +P + P+T +
Sbjct: 324 WDFKTGLCVKCIPAHSDPITSI 345
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 263 EMQKKYKEFLFTVEFEK---SMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDF 433
E +K KE+ +E +K + ++ E++ N +++ L A S + + AQ+
Sbjct: 965 EREKAQKEYELQLEMQKQKLAAEAEEEVKRRNKEERDRLDAAVSSRLASSDGVALVAQEA 1024
Query: 434 EDAANEEYSKFKFGN 478
A ++ SK+ GN
Sbjct: 1025 SAAPPKQQSKYDLGN 1039
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,767,302
Number of Sequences: 27780
Number of extensions: 301150
Number of successful extensions: 1128
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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